Gene : AT3G51890 A. thaliana TAIR10
Defline:  (1 of 2) PTHR10639//PTHR10639:SF10 - CLATHRIN LIGHT CHAIN // CLATHRIN LIGHT CHAIN 2 Genomic Order:  4211
Name:  ? AT3G51890 Secondary Identifier:  ? PAC:19665024
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G51890 0.5kb upstream 0.5kb upstream 1995 true Chr3: 19249480-19251474 Arabidopsis thaliana
AT3G51890 0.5kb upstream 0.5kb upstream 500 false Chr3: 19250975-19251474 Arabidopsis thaliana
AT3G51890 0.5kb downstream 0.5kb downstream 1995 true Chr3: 19248980-19250974 Arabidopsis thaliana
AT3G51890 0.5kb downstream 0.5kb downstream 500 false Chr3: 19248980-19249479 Arabidopsis thaliana
AT3G51890 1.0kb upstream 1.0kb upstream 2495 true Chr3: 19249480-19251974 Arabidopsis thaliana
AT3G51890 1.0kb upstream 1.0kb upstream 1000 false Chr3: 19250975-19251974 Arabidopsis thaliana
AT3G51890 1.0kb downstream 1.0kb downstream 2495 true Chr3: 19248480-19250974 Arabidopsis thaliana
AT3G51890 1.0kb downstream 1.0kb downstream 1000 false Chr3: 19248480-19249479 Arabidopsis thaliana
AT3G51890 2.0kb upstream 2.0kb upstream 3495 true Chr3: 19249480-19252974 Arabidopsis thaliana
AT3G51890 2.0kb upstream 2.0kb upstream 2000 false Chr3: 19250975-19252974 Arabidopsis thaliana
AT3G51890 2.0kb downstream 2.0kb downstream 3495 true Chr3: 19247480-19250974 Arabidopsis thaliana
AT3G51890 2.0kb downstream 2.0kb downstream 2000 false Chr3: 19247480-19249479 Arabidopsis thaliana
AT3G51890 5.0kb upstream 5.0kb upstream 6495 true Chr3: 19249480-19255974 Arabidopsis thaliana
AT3G51890 5.0kb upstream 5.0kb upstream 5000 false Chr3: 19250975-19255974 Arabidopsis thaliana
AT3G51890 5.0kb downstream 5.0kb downstream 6495 true Chr3: 19244480-19250974 Arabidopsis thaliana
AT3G51890 5.0kb downstream 5.0kb downstream 5000 false Chr3: 19244480-19249479 Arabidopsis thaliana
AT3G51890 10.0kb upstream 10.0kb upstream 11495 true Chr3: 19249480-19260974 Arabidopsis thaliana
AT3G51890 10.0kb upstream 10.0kb upstream 10000 false Chr3: 19250975-19260974 Arabidopsis thaliana
AT3G51890 10.0kb downstream 10.0kb downstream 11495 true Chr3: 19239480-19250974 Arabidopsis thaliana
AT3G51890 10.0kb downstream 10.0kb downstream 10000 false Chr3: 19239480-19249479 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375227 5261 Brassicaceae View MSA
123837813 5264 Brassicales-Malvales View MSA
124348565 5266 SBM View MSA
124247062 5268 Malvidae View MSA
124069515 5270 Rosid View MSA
123752626 5271 Pentapetalae View MSA
122796141 5272 Eudicot View MSA
122042029 5273 Angiosperm View MSA
121347289 5274 Embryophyte View MSA
123426291 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.476       High
cufflinks 8.586        
cufflinks 8.178        
cufflinks 12.112        
cufflinks 12.638        
cufflinks 9.17        

0 Strain