Gene : BAG4 A. thaliana TAIR10
Primary Identifier:  ? AT3G51780 Defline:  (1 of 1) PTHR12329:SF15 - BAG FAMILY MOLECULAR CHAPERONE REGULATOR 4
Genomic Order:  4200 Name:  ? AT3G51780
Secondary Identifier:  ? PAC:19658842
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G51780 0.5kb upstream 0.5kb upstream 2043 true Chr3: 19206768-19208810 Arabidopsis thaliana
AT3G51780 0.5kb upstream 0.5kb upstream 500 false Chr3: 19208311-19208810 Arabidopsis thaliana
AT3G51780 0.5kb downstream 0.5kb downstream 2043 true Chr3: 19206268-19208310 Arabidopsis thaliana
AT3G51780 0.5kb downstream 0.5kb downstream 500 false Chr3: 19206268-19206767 Arabidopsis thaliana
AT3G51780 1.0kb upstream 1.0kb upstream 2543 true Chr3: 19206768-19209310 Arabidopsis thaliana
AT3G51780 1.0kb upstream 1.0kb upstream 1000 false Chr3: 19208311-19209310 Arabidopsis thaliana
AT3G51780 1.0kb downstream 1.0kb downstream 2543 true Chr3: 19205768-19208310 Arabidopsis thaliana
AT3G51780 1.0kb downstream 1.0kb downstream 1000 false Chr3: 19205768-19206767 Arabidopsis thaliana
AT3G51780 2.0kb upstream 2.0kb upstream 3543 true Chr3: 19206768-19210310 Arabidopsis thaliana
AT3G51780 2.0kb upstream 2.0kb upstream 2000 false Chr3: 19208311-19210310 Arabidopsis thaliana
AT3G51780 2.0kb downstream 2.0kb downstream 3543 true Chr3: 19204768-19208310 Arabidopsis thaliana
AT3G51780 2.0kb downstream 2.0kb downstream 2000 false Chr3: 19204768-19206767 Arabidopsis thaliana
AT3G51780 5.0kb upstream 5.0kb upstream 6543 true Chr3: 19206768-19213310 Arabidopsis thaliana
AT3G51780 5.0kb upstream 5.0kb upstream 5000 false Chr3: 19208311-19213310 Arabidopsis thaliana
AT3G51780 5.0kb downstream 5.0kb downstream 6543 true Chr3: 19201768-19208310 Arabidopsis thaliana
AT3G51780 5.0kb downstream 5.0kb downstream 5000 false Chr3: 19201768-19206767 Arabidopsis thaliana
AT3G51780 10.0kb upstream 10.0kb upstream 11543 true Chr3: 19206768-19218310 Arabidopsis thaliana
AT3G51780 10.0kb upstream 10.0kb upstream 10000 false Chr3: 19208311-19218310 Arabidopsis thaliana
AT3G51780 10.0kb downstream 10.0kb downstream 11543 true Chr3: 19196768-19208310 Arabidopsis thaliana
AT3G51780 10.0kb downstream 10.0kb downstream 10000 false Chr3: 19196768-19206767 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363931 5261 Brassicaceae View MSA
123829902 5264 Brassicales-Malvales View MSA
124339134 5266 SBM View MSA
124248875 5268 Malvidae View MSA
124070656 5270 Rosid View MSA
123741539 5271 Pentapetalae View MSA
122795358 5272 Eudicot View MSA
122046997 5273 Angiosperm View MSA
121350153 5274 Embryophyte View MSA
123426824 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.532       High
cufflinks 16.005        
cufflinks 16.028        
cufflinks 16.449        
cufflinks 15.027       Low
cufflinks 16.276        

0 Strain