Gene : HSFA7A A. thaliana TAIR10
Primary Identifier:  ? AT3G51910 Defline:  (1 of 3) PTHR10015//PTHR10015:SF186 - HEAT SHOCK TRANSCRIPTION FACTOR // HEAT STRESS TRANSCRIPTION FACTOR A-2-RELATED
Genomic Order:  4213 Name:  ? AT3G51910
Secondary Identifier:  ? PAC:19658456
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G51910 0.5kb upstream 0.5kb upstream 1826 true Chr3: 19264794-19266619 Arabidopsis thaliana
AT3G51910 0.5kb upstream 0.5kb upstream 500 false Chr3: 19264794-19265293 Arabidopsis thaliana
AT3G51910 0.5kb downstream 0.5kb downstream 1826 true Chr3: 19265294-19267119 Arabidopsis thaliana
AT3G51910 0.5kb downstream 0.5kb downstream 500 false Chr3: 19266620-19267119 Arabidopsis thaliana
AT3G51910 1.0kb upstream 1.0kb upstream 2326 true Chr3: 19264294-19266619 Arabidopsis thaliana
AT3G51910 1.0kb upstream 1.0kb upstream 1000 false Chr3: 19264294-19265293 Arabidopsis thaliana
AT3G51910 1.0kb downstream 1.0kb downstream 2326 true Chr3: 19265294-19267619 Arabidopsis thaliana
AT3G51910 1.0kb downstream 1.0kb downstream 1000 false Chr3: 19266620-19267619 Arabidopsis thaliana
AT3G51910 2.0kb upstream 2.0kb upstream 3326 true Chr3: 19263294-19266619 Arabidopsis thaliana
AT3G51910 2.0kb upstream 2.0kb upstream 2000 false Chr3: 19263294-19265293 Arabidopsis thaliana
AT3G51910 2.0kb downstream 2.0kb downstream 3326 true Chr3: 19265294-19268619 Arabidopsis thaliana
AT3G51910 2.0kb downstream 2.0kb downstream 2000 false Chr3: 19266620-19268619 Arabidopsis thaliana
AT3G51910 5.0kb upstream 5.0kb upstream 6326 true Chr3: 19260294-19266619 Arabidopsis thaliana
AT3G51910 5.0kb upstream 5.0kb upstream 5000 false Chr3: 19260294-19265293 Arabidopsis thaliana
AT3G51910 5.0kb downstream 5.0kb downstream 6326 true Chr3: 19265294-19271619 Arabidopsis thaliana
AT3G51910 5.0kb downstream 5.0kb downstream 5000 false Chr3: 19266620-19271619 Arabidopsis thaliana
AT3G51910 10.0kb upstream 10.0kb upstream 11326 true Chr3: 19255294-19266619 Arabidopsis thaliana
AT3G51910 10.0kb upstream 10.0kb upstream 10000 false Chr3: 19255294-19265293 Arabidopsis thaliana
AT3G51910 10.0kb downstream 10.0kb downstream 11326 true Chr3: 19265294-19276619 Arabidopsis thaliana
AT3G51910 10.0kb downstream 10.0kb downstream 10000 false Chr3: 19266620-19276619 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365017 5261 Brassicaceae View MSA
123838243 5264 Brassicales-Malvales View MSA
124348589 5266 SBM View MSA
124254362 5268 Malvidae View MSA
124062717 5270 Rosid View MSA
123744763 5271 Pentapetalae View MSA
122793858 5272 Eudicot View MSA
122049112 5273 Angiosperm View MSA
121311252 5274 Embryophyte View MSA
123428852 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.293        
cufflinks 40.405     High  
cufflinks 3.691        
cufflinks 54.089     High High
cufflinks 1.929       Low
cufflinks 30.08     High  

0 Strain