Gene : STY1 A. thaliana TAIR10
Primary Identifier:  ? AT3G51060 Defline:  (1 of 5) PTHR31604//PTHR31604:SF3 - FAMILY NOT NAMED // PROTEIN SHI RELATED SEQUENCE 1-RELATED
Genomic Order:  4123 Name:  ? AT3G51060
Secondary Identifier:  ? PAC:19664681
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G51060 0.5kb upstream 0.5kb upstream 2562 true Chr3: 18963844-18966405 Arabidopsis thaliana
AT3G51060 0.5kb upstream 0.5kb upstream 500 false Chr3: 18963844-18964343 Arabidopsis thaliana
AT3G51060 0.5kb downstream 0.5kb downstream 2562 true Chr3: 18964344-18966905 Arabidopsis thaliana
AT3G51060 0.5kb downstream 0.5kb downstream 500 false Chr3: 18966406-18966905 Arabidopsis thaliana
AT3G51060 1.0kb upstream 1.0kb upstream 3062 true Chr3: 18963344-18966405 Arabidopsis thaliana
AT3G51060 1.0kb upstream 1.0kb upstream 1000 false Chr3: 18963344-18964343 Arabidopsis thaliana
AT3G51060 1.0kb downstream 1.0kb downstream 3062 true Chr3: 18964344-18967405 Arabidopsis thaliana
AT3G51060 1.0kb downstream 1.0kb downstream 1000 false Chr3: 18966406-18967405 Arabidopsis thaliana
AT3G51060 2.0kb upstream 2.0kb upstream 4062 true Chr3: 18962344-18966405 Arabidopsis thaliana
AT3G51060 2.0kb upstream 2.0kb upstream 2000 false Chr3: 18962344-18964343 Arabidopsis thaliana
AT3G51060 2.0kb downstream 2.0kb downstream 4062 true Chr3: 18964344-18968405 Arabidopsis thaliana
AT3G51060 2.0kb downstream 2.0kb downstream 2000 false Chr3: 18966406-18968405 Arabidopsis thaliana
AT3G51060 5.0kb upstream 5.0kb upstream 7062 true Chr3: 18959344-18966405 Arabidopsis thaliana
AT3G51060 5.0kb upstream 5.0kb upstream 5000 false Chr3: 18959344-18964343 Arabidopsis thaliana
AT3G51060 5.0kb downstream 5.0kb downstream 7062 true Chr3: 18964344-18971405 Arabidopsis thaliana
AT3G51060 5.0kb downstream 5.0kb downstream 5000 false Chr3: 18966406-18971405 Arabidopsis thaliana
AT3G51060 10.0kb upstream 10.0kb upstream 12062 true Chr3: 18954344-18966405 Arabidopsis thaliana
AT3G51060 10.0kb upstream 10.0kb upstream 10000 false Chr3: 18954344-18964343 Arabidopsis thaliana
AT3G51060 10.0kb downstream 10.0kb downstream 12062 true Chr3: 18964344-18976405 Arabidopsis thaliana
AT3G51060 10.0kb downstream 10.0kb downstream 10000 false Chr3: 18966406-18976405 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362857 5261 Brassicaceae View MSA
123839718 5264 Brassicales-Malvales View MSA
124341008 5266 SBM View MSA
124239035 5268 Malvidae View MSA
124067577 5270 Rosid View MSA
123749314 5271 Pentapetalae View MSA
122796752 5272 Eudicot View MSA
122049669 5273 Angiosperm View MSA
121344202 5274 Embryophyte View MSA
123379999 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.283        
cufflinks 0.441        
cufflinks 0.328        
cufflinks 0.736       High
cufflinks 0.254        
cufflinks 0.334     Low  

0 Strain