Gene : WRKY4 A. thaliana TAIR10
Primary Identifier:  ? AT1G13960 Defline:  (1 of 2) PTHR31221//PTHR31221:SF22 - FAMILY NOT NAMED // WRKY TRANSCRIPTION FACTOR 3-RELATED
Genomic Order:  1389 Name:  ? AT1G13960
Secondary Identifier:  ? PAC:19652502
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G13960 0.5kb upstream 0.5kb upstream 3438 true Chr1: 4775963-4779400 Arabidopsis thaliana
AT1G13960 0.5kb upstream 0.5kb upstream 500 false Chr1: 4775963-4776462 Arabidopsis thaliana
AT1G13960 0.5kb downstream 0.5kb downstream 3438 true Chr1: 4776463-4779900 Arabidopsis thaliana
AT1G13960 0.5kb downstream 0.5kb downstream 500 false Chr1: 4779401-4779900 Arabidopsis thaliana
AT1G13960 1.0kb upstream 1.0kb upstream 3938 true Chr1: 4775463-4779400 Arabidopsis thaliana
AT1G13960 1.0kb upstream 1.0kb upstream 1000 false Chr1: 4775463-4776462 Arabidopsis thaliana
AT1G13960 1.0kb downstream 1.0kb downstream 3938 true Chr1: 4776463-4780400 Arabidopsis thaliana
AT1G13960 1.0kb downstream 1.0kb downstream 1000 false Chr1: 4779401-4780400 Arabidopsis thaliana
AT1G13960 2.0kb upstream 2.0kb upstream 4938 true Chr1: 4774463-4779400 Arabidopsis thaliana
AT1G13960 2.0kb upstream 2.0kb upstream 2000 false Chr1: 4774463-4776462 Arabidopsis thaliana
AT1G13960 2.0kb downstream 2.0kb downstream 4938 true Chr1: 4776463-4781400 Arabidopsis thaliana
AT1G13960 2.0kb downstream 2.0kb downstream 2000 false Chr1: 4779401-4781400 Arabidopsis thaliana
AT1G13960 5.0kb upstream 5.0kb upstream 7938 true Chr1: 4771463-4779400 Arabidopsis thaliana
AT1G13960 5.0kb upstream 5.0kb upstream 5000 false Chr1: 4771463-4776462 Arabidopsis thaliana
AT1G13960 5.0kb downstream 5.0kb downstream 7938 true Chr1: 4776463-4784400 Arabidopsis thaliana
AT1G13960 5.0kb downstream 5.0kb downstream 5000 false Chr1: 4779401-4784400 Arabidopsis thaliana
AT1G13960 10.0kb upstream 10.0kb upstream 12938 true Chr1: 4766463-4779400 Arabidopsis thaliana
AT1G13960 10.0kb upstream 10.0kb upstream 10000 false Chr1: 4766463-4776462 Arabidopsis thaliana
AT1G13960 10.0kb downstream 10.0kb downstream 12938 true Chr1: 4776463-4789400 Arabidopsis thaliana
AT1G13960 10.0kb downstream 10.0kb downstream 10000 false Chr1: 4779401-4789400 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370037 5261 Brassicaceae View MSA
123835692 5264 Brassicales-Malvales View MSA
124343983 5266 SBM View MSA
124253735 5268 Malvidae View MSA
124070868 5270 Rosid View MSA
123742422 5271 Pentapetalae View MSA
122788508 5272 Eudicot View MSA
122041677 5273 Angiosperm View MSA
121349380 5274 Embryophyte View MSA
123428268 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.128        
cufflinks 5.71        
cufflinks 4.501       Low
cufflinks 6.78       High
cufflinks 5.744        
cufflinks 5.012        

0 Strain