Gene : NQR A. thaliana TAIR10
Primary Identifier:  ? AT1G49670 Defline:  (1 of 1) 1.1.1.141 - 15-hydroxyprostaglandin dehydrogenase (NAD(+)) / 15-hydroxyprostaglandin dehydrogenase
Genomic Order:  3993 Name:  ? AT1G49670
Secondary Identifier:  ? PAC:19652165
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G49670 0.5kb upstream 0.5kb upstream 5805 true Chr1: 18380804-18386608 Arabidopsis thaliana
AT1G49670 0.5kb upstream 0.5kb upstream 500 false Chr1: 18386109-18386608 Arabidopsis thaliana
AT1G49670 0.5kb downstream 0.5kb downstream 5805 true Chr1: 18380304-18386108 Arabidopsis thaliana
AT1G49670 0.5kb downstream 0.5kb downstream 500 false Chr1: 18380304-18380803 Arabidopsis thaliana
AT1G49670 1.0kb upstream 1.0kb upstream 6305 true Chr1: 18380804-18387108 Arabidopsis thaliana
AT1G49670 1.0kb upstream 1.0kb upstream 1000 false Chr1: 18386109-18387108 Arabidopsis thaliana
AT1G49670 1.0kb downstream 1.0kb downstream 6305 true Chr1: 18379804-18386108 Arabidopsis thaliana
AT1G49670 1.0kb downstream 1.0kb downstream 1000 false Chr1: 18379804-18380803 Arabidopsis thaliana
AT1G49670 2.0kb upstream 2.0kb upstream 7305 true Chr1: 18380804-18388108 Arabidopsis thaliana
AT1G49670 2.0kb upstream 2.0kb upstream 2000 false Chr1: 18386109-18388108 Arabidopsis thaliana
AT1G49670 2.0kb downstream 2.0kb downstream 7305 true Chr1: 18378804-18386108 Arabidopsis thaliana
AT1G49670 2.0kb downstream 2.0kb downstream 2000 false Chr1: 18378804-18380803 Arabidopsis thaliana
AT1G49670 5.0kb upstream 5.0kb upstream 10305 true Chr1: 18380804-18391108 Arabidopsis thaliana
AT1G49670 5.0kb upstream 5.0kb upstream 5000 false Chr1: 18386109-18391108 Arabidopsis thaliana
AT1G49670 5.0kb downstream 5.0kb downstream 10305 true Chr1: 18375804-18386108 Arabidopsis thaliana
AT1G49670 5.0kb downstream 5.0kb downstream 5000 false Chr1: 18375804-18380803 Arabidopsis thaliana
AT1G49670 10.0kb upstream 10.0kb upstream 15305 true Chr1: 18380804-18396108 Arabidopsis thaliana
AT1G49670 10.0kb upstream 10.0kb upstream 10000 false Chr1: 18386109-18396108 Arabidopsis thaliana
AT1G49670 10.0kb downstream 10.0kb downstream 15305 true Chr1: 18370804-18386108 Arabidopsis thaliana
AT1G49670 10.0kb downstream 10.0kb downstream 10000 false Chr1: 18370804-18380803 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026347 5273 Angiosperm View MSA
122362694 5261 Brassicaceae View MSA
123831145 5264 Brassicales-Malvales View MSA
124350075 5266 SBM View MSA
124240470 5268 Malvidae View MSA
124064658 5270 Rosid View MSA
123740721 5271 Pentapetalae View MSA
122785965 5272 Eudicot View MSA
121346916 5274 Embryophyte View MSA
123424584 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.608        
cufflinks 5.958       Low
cufflinks 8.234       High
cufflinks 6.449        
cufflinks 7.315        
cufflinks 5.892       Low

0 Strain