Gene : EDR1 A. thaliana TAIR10
Primary Identifier:  ? AT1G08720 Defline:  (1 of 1) PTHR23257//PTHR23257:SF440 - SERINE-THREONINE PROTEIN KINASE // SUBFAMILY NOT NAMED
Genomic Order:  822 Name:  ? AT1G08720
Secondary Identifier:  ? PAC:19654068
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G08720 0.5kb upstream 0.5kb upstream 5768 true Chr1: 2773530-2779297 Arabidopsis thaliana
AT1G08720 0.5kb upstream 0.5kb upstream 500 false Chr1: 2773530-2774029 Arabidopsis thaliana
AT1G08720 0.5kb downstream 0.5kb downstream 5768 true Chr1: 2774030-2779797 Arabidopsis thaliana
AT1G08720 0.5kb downstream 0.5kb downstream 500 false Chr1: 2779298-2779797 Arabidopsis thaliana
AT1G08720 1.0kb upstream 1.0kb upstream 6268 true Chr1: 2773030-2779297 Arabidopsis thaliana
AT1G08720 1.0kb upstream 1.0kb upstream 1000 false Chr1: 2773030-2774029 Arabidopsis thaliana
AT1G08720 1.0kb downstream 1.0kb downstream 6268 true Chr1: 2774030-2780297 Arabidopsis thaliana
AT1G08720 1.0kb downstream 1.0kb downstream 1000 false Chr1: 2779298-2780297 Arabidopsis thaliana
AT1G08720 2.0kb upstream 2.0kb upstream 7268 true Chr1: 2772030-2779297 Arabidopsis thaliana
AT1G08720 2.0kb upstream 2.0kb upstream 2000 false Chr1: 2772030-2774029 Arabidopsis thaliana
AT1G08720 2.0kb downstream 2.0kb downstream 7268 true Chr1: 2774030-2781297 Arabidopsis thaliana
AT1G08720 2.0kb downstream 2.0kb downstream 2000 false Chr1: 2779298-2781297 Arabidopsis thaliana
AT1G08720 5.0kb upstream 5.0kb upstream 10268 true Chr1: 2769030-2779297 Arabidopsis thaliana
AT1G08720 5.0kb upstream 5.0kb upstream 5000 false Chr1: 2769030-2774029 Arabidopsis thaliana
AT1G08720 5.0kb downstream 5.0kb downstream 10268 true Chr1: 2774030-2784297 Arabidopsis thaliana
AT1G08720 5.0kb downstream 5.0kb downstream 5000 false Chr1: 2779298-2784297 Arabidopsis thaliana
AT1G08720 10.0kb upstream 10.0kb upstream 15268 true Chr1: 2764030-2779297 Arabidopsis thaliana
AT1G08720 10.0kb upstream 10.0kb upstream 10000 false Chr1: 2764030-2774029 Arabidopsis thaliana
AT1G08720 10.0kb downstream 10.0kb downstream 15268 true Chr1: 2774030-2789297 Arabidopsis thaliana
AT1G08720 10.0kb downstream 10.0kb downstream 10000 false Chr1: 2779298-2789297 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363611 5261 Brassicaceae View MSA
123835776 5264 Brassicales-Malvales View MSA
124342715 5266 SBM View MSA
124242980 5268 Malvidae View MSA
124069123 5270 Rosid View MSA
123738412 5271 Pentapetalae View MSA
122795916 5272 Eudicot View MSA
122044929 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121347926 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.736        
cufflinks 26.36       High
cufflinks 5.876       Low
cufflinks 17.473        
cufflinks 6.891        
cufflinks 20.596        

0 Strain