Gene : AT1G03590 A. thaliana TAIR10
Defline:  (1 of 2) PTHR13832:SF193 - PROTEIN PHOSPHATASE 2C 1-RELATED Genomic Order:  273
Name:  ? AT1G03590 Secondary Identifier:  ? PAC:19649097
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G03590 0.5kb upstream 0.5kb upstream 3765 true Chr1: 894254-898018 Arabidopsis thaliana
AT1G03590 0.5kb upstream 0.5kb upstream 500 false Chr1: 897519-898018 Arabidopsis thaliana
AT1G03590 0.5kb downstream 0.5kb downstream 3765 true Chr1: 893754-897518 Arabidopsis thaliana
AT1G03590 0.5kb downstream 0.5kb downstream 500 false Chr1: 893754-894253 Arabidopsis thaliana
AT1G03590 1.0kb upstream 1.0kb upstream 4265 true Chr1: 894254-898518 Arabidopsis thaliana
AT1G03590 1.0kb upstream 1.0kb upstream 1000 false Chr1: 897519-898518 Arabidopsis thaliana
AT1G03590 1.0kb downstream 1.0kb downstream 4265 true Chr1: 893254-897518 Arabidopsis thaliana
AT1G03590 1.0kb downstream 1.0kb downstream 1000 false Chr1: 893254-894253 Arabidopsis thaliana
AT1G03590 2.0kb upstream 2.0kb upstream 5265 true Chr1: 894254-899518 Arabidopsis thaliana
AT1G03590 2.0kb upstream 2.0kb upstream 2000 false Chr1: 897519-899518 Arabidopsis thaliana
AT1G03590 2.0kb downstream 2.0kb downstream 5265 true Chr1: 892254-897518 Arabidopsis thaliana
AT1G03590 2.0kb downstream 2.0kb downstream 2000 false Chr1: 892254-894253 Arabidopsis thaliana
AT1G03590 5.0kb upstream 5.0kb upstream 8265 true Chr1: 894254-902518 Arabidopsis thaliana
AT1G03590 5.0kb upstream 5.0kb upstream 5000 false Chr1: 897519-902518 Arabidopsis thaliana
AT1G03590 5.0kb downstream 5.0kb downstream 8265 true Chr1: 889254-897518 Arabidopsis thaliana
AT1G03590 5.0kb downstream 5.0kb downstream 5000 false Chr1: 889254-894253 Arabidopsis thaliana
AT1G03590 10.0kb upstream 10.0kb upstream 13265 true Chr1: 894254-907518 Arabidopsis thaliana
AT1G03590 10.0kb upstream 10.0kb upstream 10000 false Chr1: 897519-907518 Arabidopsis thaliana
AT1G03590 10.0kb downstream 10.0kb downstream 13265 true Chr1: 884254-897518 Arabidopsis thaliana
AT1G03590 10.0kb downstream 10.0kb downstream 10000 false Chr1: 884254-894253 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027541 5273 Angiosperm View MSA
122365666 5261 Brassicaceae View MSA
123799009 5264 Brassicales-Malvales View MSA
124296576 5266 SBM View MSA
124148687 5268 Malvidae View MSA
124038359 5270 Rosid View MSA
123739469 5271 Pentapetalae View MSA
122786449 5272 Eudicot View MSA
121350683 5274 Embryophyte View MSA
123426661 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.186        
cufflinks 7.17        
cufflinks 7.179        
cufflinks 9.852       High
cufflinks 7.772        
cufflinks 9.328        

0 Strain