Gene : AT1G80810 A. thaliana TAIR10
Defline:  (1 of 3) PTHR12663//PTHR12663:SF3 - ANDROGEN INDUCED INHIBITOR OF PROLIFERATION AS3 / PDS5-RELATED // ASPARTYL BETA-HYDROXYLASE N-TERMINAL REGION DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  7058
Name:  ? AT1G80810 Secondary Identifier:  ? PAC:19651776
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G80810 0.5kb upstream 0.5kb upstream 4112 true Chr1: 30364787-30368898 Arabidopsis thaliana
AT1G80810 0.5kb upstream 0.5kb upstream 500 false Chr1: 30364787-30365286 Arabidopsis thaliana
AT1G80810 0.5kb downstream 0.5kb downstream 4112 true Chr1: 30365287-30369398 Arabidopsis thaliana
AT1G80810 0.5kb downstream 0.5kb downstream 500 false Chr1: 30368899-30369398 Arabidopsis thaliana
AT1G80810 1.0kb upstream 1.0kb upstream 4612 true Chr1: 30364287-30368898 Arabidopsis thaliana
AT1G80810 1.0kb upstream 1.0kb upstream 1000 false Chr1: 30364287-30365286 Arabidopsis thaliana
AT1G80810 1.0kb downstream 1.0kb downstream 4612 true Chr1: 30365287-30369898 Arabidopsis thaliana
AT1G80810 1.0kb downstream 1.0kb downstream 1000 false Chr1: 30368899-30369898 Arabidopsis thaliana
AT1G80810 2.0kb upstream 2.0kb upstream 5612 true Chr1: 30363287-30368898 Arabidopsis thaliana
AT1G80810 2.0kb upstream 2.0kb upstream 2000 false Chr1: 30363287-30365286 Arabidopsis thaliana
AT1G80810 2.0kb downstream 2.0kb downstream 5612 true Chr1: 30365287-30370898 Arabidopsis thaliana
AT1G80810 2.0kb downstream 2.0kb downstream 2000 false Chr1: 30368899-30370898 Arabidopsis thaliana
AT1G80810 5.0kb upstream 5.0kb upstream 8612 true Chr1: 30360287-30368898 Arabidopsis thaliana
AT1G80810 5.0kb upstream 5.0kb upstream 5000 false Chr1: 30360287-30365286 Arabidopsis thaliana
AT1G80810 5.0kb downstream 5.0kb downstream 8612 true Chr1: 30365287-30373898 Arabidopsis thaliana
AT1G80810 5.0kb downstream 5.0kb downstream 5000 false Chr1: 30368899-30373898 Arabidopsis thaliana
AT1G80810 10.0kb upstream 10.0kb upstream 13612 true Chr1: 30355287-30368898 Arabidopsis thaliana
AT1G80810 10.0kb upstream 10.0kb upstream 10000 false Chr1: 30355287-30365286 Arabidopsis thaliana
AT1G80810 10.0kb downstream 10.0kb downstream 13612 true Chr1: 30365287-30378898 Arabidopsis thaliana
AT1G80810 10.0kb downstream 10.0kb downstream 10000 false Chr1: 30368899-30378898 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366269 5261 Brassicaceae View MSA
123838757 5264 Brassicales-Malvales View MSA
124322495 5266 SBM View MSA
124251613 5268 Malvidae View MSA
124073544 5270 Rosid View MSA
123751665 5271 Pentapetalae View MSA
122793321 5272 Eudicot View MSA
122042349 5273 Angiosperm View MSA
121309949 5274 Embryophyte View MSA
123426721 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.383        
cufflinks 2.624        
cufflinks 1.756       Low
cufflinks 2.916       High
cufflinks 1.962        
cufflinks 2.502        

0 Strain