Gene : PIN3 A. thaliana TAIR10
Primary Identifier:  ? AT1G70940 Defline:  (1 of 8) K13947 - auxin efflux carrier family (PIN)
Genomic Order:  6054 Name:  ? AT1G70940
Secondary Identifier:  ? PAC:19652960
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G70940 0.5kb upstream 0.5kb upstream 3842 true Chr1: 26742554-26746395 Arabidopsis thaliana
AT1G70940 0.5kb upstream 0.5kb upstream 500 false Chr1: 26742554-26743053 Arabidopsis thaliana
AT1G70940 0.5kb downstream 0.5kb downstream 3842 true Chr1: 26743054-26746895 Arabidopsis thaliana
AT1G70940 0.5kb downstream 0.5kb downstream 500 false Chr1: 26746396-26746895 Arabidopsis thaliana
AT1G70940 1.0kb upstream 1.0kb upstream 4342 true Chr1: 26742054-26746395 Arabidopsis thaliana
AT1G70940 1.0kb upstream 1.0kb upstream 1000 false Chr1: 26742054-26743053 Arabidopsis thaliana
AT1G70940 1.0kb downstream 1.0kb downstream 4342 true Chr1: 26743054-26747395 Arabidopsis thaliana
AT1G70940 1.0kb downstream 1.0kb downstream 1000 false Chr1: 26746396-26747395 Arabidopsis thaliana
AT1G70940 2.0kb upstream 2.0kb upstream 5342 true Chr1: 26741054-26746395 Arabidopsis thaliana
AT1G70940 2.0kb upstream 2.0kb upstream 2000 false Chr1: 26741054-26743053 Arabidopsis thaliana
AT1G70940 2.0kb downstream 2.0kb downstream 5342 true Chr1: 26743054-26748395 Arabidopsis thaliana
AT1G70940 2.0kb downstream 2.0kb downstream 2000 false Chr1: 26746396-26748395 Arabidopsis thaliana
AT1G70940 5.0kb upstream 5.0kb upstream 8342 true Chr1: 26738054-26746395 Arabidopsis thaliana
AT1G70940 5.0kb upstream 5.0kb upstream 5000 false Chr1: 26738054-26743053 Arabidopsis thaliana
AT1G70940 5.0kb downstream 5.0kb downstream 8342 true Chr1: 26743054-26751395 Arabidopsis thaliana
AT1G70940 5.0kb downstream 5.0kb downstream 5000 false Chr1: 26746396-26751395 Arabidopsis thaliana
AT1G70940 10.0kb upstream 10.0kb upstream 13342 true Chr1: 26733054-26746395 Arabidopsis thaliana
AT1G70940 10.0kb upstream 10.0kb upstream 10000 false Chr1: 26733054-26743053 Arabidopsis thaliana
AT1G70940 10.0kb downstream 10.0kb downstream 13342 true Chr1: 26743054-26756395 Arabidopsis thaliana
AT1G70940 10.0kb downstream 10.0kb downstream 10000 false Chr1: 26746396-26756395 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369164 5261 Brassicaceae View MSA
123839868 5264 Brassicales-Malvales View MSA
124349829 5266 SBM View MSA
124250518 5268 Malvidae View MSA
124067962 5270 Rosid View MSA
123747841 5271 Pentapetalae View MSA
122796951 5272 Eudicot View MSA
122046141 5273 Angiosperm View MSA
121351759 5274 Embryophyte View MSA
123382310 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 32.033     High  
cufflinks 33.156     High  
cufflinks 18.908       Low
cufflinks 38.238     High  
cufflinks 16.547       Low
cufflinks 49.202     High High

0 Strain