Gene : AT1G13000 A. thaliana TAIR10
Defline:  (1 of 11) PF05212 - Protein of unknown function (DUF707) (DUF707) Genomic Order:  1291
Name:  ? AT1G13000 Secondary Identifier:  ? PAC:19651034
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G13000 0.5kb upstream 0.5kb upstream 3872 true Chr1: 4436105-4439976 Arabidopsis thaliana
AT1G13000 0.5kb upstream 0.5kb upstream 500 false Chr1: 4439477-4439976 Arabidopsis thaliana
AT1G13000 0.5kb downstream 0.5kb downstream 3872 true Chr1: 4435605-4439476 Arabidopsis thaliana
AT1G13000 0.5kb downstream 0.5kb downstream 500 false Chr1: 4435605-4436104 Arabidopsis thaliana
AT1G13000 1.0kb upstream 1.0kb upstream 4372 true Chr1: 4436105-4440476 Arabidopsis thaliana
AT1G13000 1.0kb upstream 1.0kb upstream 1000 false Chr1: 4439477-4440476 Arabidopsis thaliana
AT1G13000 1.0kb downstream 1.0kb downstream 4372 true Chr1: 4435105-4439476 Arabidopsis thaliana
AT1G13000 1.0kb downstream 1.0kb downstream 1000 false Chr1: 4435105-4436104 Arabidopsis thaliana
AT1G13000 2.0kb upstream 2.0kb upstream 5372 true Chr1: 4436105-4441476 Arabidopsis thaliana
AT1G13000 2.0kb upstream 2.0kb upstream 2000 false Chr1: 4439477-4441476 Arabidopsis thaliana
AT1G13000 2.0kb downstream 2.0kb downstream 5372 true Chr1: 4434105-4439476 Arabidopsis thaliana
AT1G13000 2.0kb downstream 2.0kb downstream 2000 false Chr1: 4434105-4436104 Arabidopsis thaliana
AT1G13000 5.0kb upstream 5.0kb upstream 8372 true Chr1: 4436105-4444476 Arabidopsis thaliana
AT1G13000 5.0kb upstream 5.0kb upstream 5000 false Chr1: 4439477-4444476 Arabidopsis thaliana
AT1G13000 5.0kb downstream 5.0kb downstream 8372 true Chr1: 4431105-4439476 Arabidopsis thaliana
AT1G13000 5.0kb downstream 5.0kb downstream 5000 false Chr1: 4431105-4436104 Arabidopsis thaliana
AT1G13000 10.0kb upstream 10.0kb upstream 13372 true Chr1: 4436105-4449476 Arabidopsis thaliana
AT1G13000 10.0kb upstream 10.0kb upstream 10000 false Chr1: 4439477-4449476 Arabidopsis thaliana
AT1G13000 10.0kb downstream 10.0kb downstream 13372 true Chr1: 4426105-4439476 Arabidopsis thaliana
AT1G13000 10.0kb downstream 10.0kb downstream 10000 false Chr1: 4426105-4436104 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375419 5261 Brassicaceae View MSA
123839660 5264 Brassicales-Malvales View MSA
124347021 5266 SBM View MSA
124247841 5268 Malvidae View MSA
124068224 5270 Rosid View MSA
123742371 5271 Pentapetalae View MSA
122797381 5272 Eudicot View MSA
122046740 5273 Angiosperm View MSA
121347735 5274 Embryophyte View MSA
123426523 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.125        
cufflinks 4.926        
cufflinks 3.591       Low
cufflinks 5.077        
cufflinks 4.91        
cufflinks 4.744        

0 Strain