Gene : AT1G12550 A. thaliana TAIR10
Defline:  (1 of 1) PTHR10996:SF131 - GLYOXYLATE/HYDROXYPYRUVATE REDUCTASE HPR3 Genomic Order:  1242
Name:  ? AT1G12550 Secondary Identifier:  ? PAC:19654128
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G12550 0.5kb upstream 0.5kb upstream 1888 true Chr1: 4274094-4275981 Arabidopsis thaliana
AT1G12550 0.5kb upstream 0.5kb upstream 500 false Chr1: 4274094-4274593 Arabidopsis thaliana
AT1G12550 0.5kb downstream 0.5kb downstream 1888 true Chr1: 4274594-4276481 Arabidopsis thaliana
AT1G12550 0.5kb downstream 0.5kb downstream 500 false Chr1: 4275982-4276481 Arabidopsis thaliana
AT1G12550 1.0kb upstream 1.0kb upstream 2388 true Chr1: 4273594-4275981 Arabidopsis thaliana
AT1G12550 1.0kb upstream 1.0kb upstream 1000 false Chr1: 4273594-4274593 Arabidopsis thaliana
AT1G12550 1.0kb downstream 1.0kb downstream 2388 true Chr1: 4274594-4276981 Arabidopsis thaliana
AT1G12550 1.0kb downstream 1.0kb downstream 1000 false Chr1: 4275982-4276981 Arabidopsis thaliana
AT1G12550 2.0kb upstream 2.0kb upstream 3388 true Chr1: 4272594-4275981 Arabidopsis thaliana
AT1G12550 2.0kb upstream 2.0kb upstream 2000 false Chr1: 4272594-4274593 Arabidopsis thaliana
AT1G12550 2.0kb downstream 2.0kb downstream 3388 true Chr1: 4274594-4277981 Arabidopsis thaliana
AT1G12550 2.0kb downstream 2.0kb downstream 2000 false Chr1: 4275982-4277981 Arabidopsis thaliana
AT1G12550 5.0kb upstream 5.0kb upstream 6388 true Chr1: 4269594-4275981 Arabidopsis thaliana
AT1G12550 5.0kb upstream 5.0kb upstream 5000 false Chr1: 4269594-4274593 Arabidopsis thaliana
AT1G12550 5.0kb downstream 5.0kb downstream 6388 true Chr1: 4274594-4280981 Arabidopsis thaliana
AT1G12550 5.0kb downstream 5.0kb downstream 5000 false Chr1: 4275982-4280981 Arabidopsis thaliana
AT1G12550 10.0kb upstream 10.0kb upstream 11388 true Chr1: 4264594-4275981 Arabidopsis thaliana
AT1G12550 10.0kb upstream 10.0kb upstream 10000 false Chr1: 4264594-4274593 Arabidopsis thaliana
AT1G12550 10.0kb downstream 10.0kb downstream 11388 true Chr1: 4274594-4285981 Arabidopsis thaliana
AT1G12550 10.0kb downstream 10.0kb downstream 10000 false Chr1: 4275982-4285981 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363830 5261 Brassicaceae View MSA
123836614 5264 Brassicales-Malvales View MSA
124346670 5266 SBM View MSA
124251933 5268 Malvidae View MSA
124074287 5270 Rosid View MSA
123747917 5271 Pentapetalae View MSA
122795795 5272 Eudicot View MSA
122049787 5273 Angiosperm View MSA
121349350 5274 Embryophyte View MSA
123427510 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.805        
cufflinks 11.271        
cufflinks 3.441       Low
cufflinks 10.989        
cufflinks 4.335        
cufflinks 12.357       High

0 Strain