Gene : AT1G12320 A. thaliana TAIR10
Defline:  (1 of 4) PTHR33593:SF2 - F5O11.5 Genomic Order:  1217
Name:  ? AT1G12320 Secondary Identifier:  ? PAC:19653687
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G12320 0.5kb upstream 0.5kb upstream 1488 true Chr1: 4188855-4190342 Arabidopsis thaliana
AT1G12320 0.5kb upstream 0.5kb upstream 500 false Chr1: 4188855-4189354 Arabidopsis thaliana
AT1G12320 0.5kb downstream 0.5kb downstream 1488 true Chr1: 4189355-4190842 Arabidopsis thaliana
AT1G12320 0.5kb downstream 0.5kb downstream 500 false Chr1: 4190343-4190842 Arabidopsis thaliana
AT1G12320 1.0kb upstream 1.0kb upstream 1988 true Chr1: 4188355-4190342 Arabidopsis thaliana
AT1G12320 1.0kb upstream 1.0kb upstream 1000 false Chr1: 4188355-4189354 Arabidopsis thaliana
AT1G12320 1.0kb downstream 1.0kb downstream 1988 true Chr1: 4189355-4191342 Arabidopsis thaliana
AT1G12320 1.0kb downstream 1.0kb downstream 1000 false Chr1: 4190343-4191342 Arabidopsis thaliana
AT1G12320 2.0kb upstream 2.0kb upstream 2988 true Chr1: 4187355-4190342 Arabidopsis thaliana
AT1G12320 2.0kb upstream 2.0kb upstream 2000 false Chr1: 4187355-4189354 Arabidopsis thaliana
AT1G12320 2.0kb downstream 2.0kb downstream 2988 true Chr1: 4189355-4192342 Arabidopsis thaliana
AT1G12320 2.0kb downstream 2.0kb downstream 2000 false Chr1: 4190343-4192342 Arabidopsis thaliana
AT1G12320 5.0kb upstream 5.0kb upstream 5988 true Chr1: 4184355-4190342 Arabidopsis thaliana
AT1G12320 5.0kb upstream 5.0kb upstream 5000 false Chr1: 4184355-4189354 Arabidopsis thaliana
AT1G12320 5.0kb downstream 5.0kb downstream 5988 true Chr1: 4189355-4195342 Arabidopsis thaliana
AT1G12320 5.0kb downstream 5.0kb downstream 5000 false Chr1: 4190343-4195342 Arabidopsis thaliana
AT1G12320 10.0kb upstream 10.0kb upstream 10988 true Chr1: 4179355-4190342 Arabidopsis thaliana
AT1G12320 10.0kb upstream 10.0kb upstream 10000 false Chr1: 4179355-4189354 Arabidopsis thaliana
AT1G12320 10.0kb downstream 10.0kb downstream 10988 true Chr1: 4189355-4200342 Arabidopsis thaliana
AT1G12320 10.0kb downstream 10.0kb downstream 10000 false Chr1: 4190343-4200342 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041482 5273 Angiosperm View MSA
122363390 5261 Brassicaceae View MSA
123798532 5264 Brassicales-Malvales View MSA
124296157 5266 SBM View MSA
124148389 5268 Malvidae View MSA
123874388 5270 Rosid View MSA
123743657 5271 Pentapetalae View MSA
122790548 5272 Eudicot View MSA
121348528 5274 Embryophyte View MSA
123380900 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.899       High
cufflinks 4.438        
cufflinks 5.153        
cufflinks 4.572        
cufflinks 5.66        
cufflinks 3.491       Low

0 Strain