Gene : ATBETAFRUCT4 A. thaliana TAIR10
Primary Identifier:  ? AT1G12240 Defline:  (1 of 2) PTHR31953:SF17 - ACID BETA-FRUCTOFURANOSIDASE 3, VACUOLAR-RELATED
Genomic Order:  1208 Name:  ? AT1G12240
Secondary Identifier:  ? PAC:19653540
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-621 Arabidopsis thaliana pathologic  
Athaliana PWY66-373 Arabidopsis thaliana pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G12240 0.5kb upstream 0.5kb upstream 4493 true Chr1: 4153152-4157644 Arabidopsis thaliana
AT1G12240 0.5kb upstream 0.5kb upstream 500 false Chr1: 4153152-4153651 Arabidopsis thaliana
AT1G12240 0.5kb downstream 0.5kb downstream 4493 true Chr1: 4153652-4158144 Arabidopsis thaliana
AT1G12240 0.5kb downstream 0.5kb downstream 500 false Chr1: 4157645-4158144 Arabidopsis thaliana
AT1G12240 1.0kb upstream 1.0kb upstream 4993 true Chr1: 4152652-4157644 Arabidopsis thaliana
AT1G12240 1.0kb upstream 1.0kb upstream 1000 false Chr1: 4152652-4153651 Arabidopsis thaliana
AT1G12240 1.0kb downstream 1.0kb downstream 4993 true Chr1: 4153652-4158644 Arabidopsis thaliana
AT1G12240 1.0kb downstream 1.0kb downstream 1000 false Chr1: 4157645-4158644 Arabidopsis thaliana
AT1G12240 2.0kb upstream 2.0kb upstream 5993 true Chr1: 4151652-4157644 Arabidopsis thaliana
AT1G12240 2.0kb upstream 2.0kb upstream 2000 false Chr1: 4151652-4153651 Arabidopsis thaliana
AT1G12240 2.0kb downstream 2.0kb downstream 5993 true Chr1: 4153652-4159644 Arabidopsis thaliana
AT1G12240 2.0kb downstream 2.0kb downstream 2000 false Chr1: 4157645-4159644 Arabidopsis thaliana
AT1G12240 5.0kb upstream 5.0kb upstream 8993 true Chr1: 4148652-4157644 Arabidopsis thaliana
AT1G12240 5.0kb upstream 5.0kb upstream 5000 false Chr1: 4148652-4153651 Arabidopsis thaliana
AT1G12240 5.0kb downstream 5.0kb downstream 8993 true Chr1: 4153652-4162644 Arabidopsis thaliana
AT1G12240 5.0kb downstream 5.0kb downstream 5000 false Chr1: 4157645-4162644 Arabidopsis thaliana
AT1G12240 10.0kb upstream 10.0kb upstream 13993 true Chr1: 4143652-4157644 Arabidopsis thaliana
AT1G12240 10.0kb upstream 10.0kb upstream 10000 false Chr1: 4143652-4153651 Arabidopsis thaliana
AT1G12240 10.0kb downstream 10.0kb downstream 13993 true Chr1: 4153652-4167644 Arabidopsis thaliana
AT1G12240 10.0kb downstream 10.0kb downstream 10000 false Chr1: 4157645-4167644 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362944 5261 Brassicaceae View MSA
123833145 5264 Brassicales-Malvales View MSA
124346860 5266 SBM View MSA
124237884 5268 Malvidae View MSA
124068075 5270 Rosid View MSA
123746739 5271 Pentapetalae View MSA
122793331 5272 Eudicot View MSA
122044228 5273 Angiosperm View MSA
121350675 5274 Embryophyte View MSA
123428659 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 46.212     High  
cufflinks 12.506       Low
cufflinks 101.698     High  
cufflinks 21.816        
cufflinks 131.587     High High
cufflinks 28.569        

0 Strain