Gene : LRX1 A. thaliana TAIR10
Primary Identifier:  ? AT1G12040 Defline:  (1 of 2) PTHR32093:SF40 - LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 1-RELATED
Genomic Order:  1186 Name:  ? AT1G12040
Secondary Identifier:  ? PAC:19653709
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G12040 0.5kb upstream 0.5kb upstream 2944 true Chr1: 4069624-4072567 Arabidopsis thaliana
AT1G12040 0.5kb upstream 0.5kb upstream 500 false Chr1: 4069624-4070123 Arabidopsis thaliana
AT1G12040 0.5kb downstream 0.5kb downstream 2944 true Chr1: 4070124-4073067 Arabidopsis thaliana
AT1G12040 0.5kb downstream 0.5kb downstream 500 false Chr1: 4072568-4073067 Arabidopsis thaliana
AT1G12040 1.0kb upstream 1.0kb upstream 3444 true Chr1: 4069124-4072567 Arabidopsis thaliana
AT1G12040 1.0kb upstream 1.0kb upstream 1000 false Chr1: 4069124-4070123 Arabidopsis thaliana
AT1G12040 1.0kb downstream 1.0kb downstream 3444 true Chr1: 4070124-4073567 Arabidopsis thaliana
AT1G12040 1.0kb downstream 1.0kb downstream 1000 false Chr1: 4072568-4073567 Arabidopsis thaliana
AT1G12040 2.0kb upstream 2.0kb upstream 4444 true Chr1: 4068124-4072567 Arabidopsis thaliana
AT1G12040 2.0kb upstream 2.0kb upstream 2000 false Chr1: 4068124-4070123 Arabidopsis thaliana
AT1G12040 2.0kb downstream 2.0kb downstream 4444 true Chr1: 4070124-4074567 Arabidopsis thaliana
AT1G12040 2.0kb downstream 2.0kb downstream 2000 false Chr1: 4072568-4074567 Arabidopsis thaliana
AT1G12040 5.0kb upstream 5.0kb upstream 7444 true Chr1: 4065124-4072567 Arabidopsis thaliana
AT1G12040 5.0kb upstream 5.0kb upstream 5000 false Chr1: 4065124-4070123 Arabidopsis thaliana
AT1G12040 5.0kb downstream 5.0kb downstream 7444 true Chr1: 4070124-4077567 Arabidopsis thaliana
AT1G12040 5.0kb downstream 5.0kb downstream 5000 false Chr1: 4072568-4077567 Arabidopsis thaliana
AT1G12040 10.0kb upstream 10.0kb upstream 12444 true Chr1: 4060124-4072567 Arabidopsis thaliana
AT1G12040 10.0kb upstream 10.0kb upstream 10000 false Chr1: 4060124-4070123 Arabidopsis thaliana
AT1G12040 10.0kb downstream 10.0kb downstream 12444 true Chr1: 4070124-4082567 Arabidopsis thaliana
AT1G12040 10.0kb downstream 10.0kb downstream 10000 false Chr1: 4072568-4082567 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375536 5261 Brassicaceae View MSA
123841495 5264 Brassicales-Malvales View MSA
124351661 5266 SBM View MSA
124254554 5268 Malvidae View MSA
124074520 5270 Rosid View MSA
123751287 5271 Pentapetalae View MSA
122794768 5272 Eudicot View MSA
122048760 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121349764 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.236     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.441        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.244       High

0 Strain