Gene : AT1G12100 A. thaliana TAIR10
Defline:  (1 of 1) PTHR31731//PTHR31731:SF8 - FAMILY NOT NAMED // BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN Genomic Order:  1193
Name:  ? AT1G12100 Secondary Identifier:  ? PAC:19655794
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G12100 0.5kb upstream 0.5kb upstream 1100 true Chr1: 4094746-4095845 Arabidopsis thaliana
AT1G12100 0.5kb upstream 0.5kb upstream 500 false Chr1: 4094746-4095245 Arabidopsis thaliana
AT1G12100 0.5kb downstream 0.5kb downstream 1100 true Chr1: 4095246-4096345 Arabidopsis thaliana
AT1G12100 0.5kb downstream 0.5kb downstream 500 false Chr1: 4095846-4096345 Arabidopsis thaliana
AT1G12100 1.0kb upstream 1.0kb upstream 1600 true Chr1: 4094246-4095845 Arabidopsis thaliana
AT1G12100 1.0kb upstream 1.0kb upstream 1000 false Chr1: 4094246-4095245 Arabidopsis thaliana
AT1G12100 1.0kb downstream 1.0kb downstream 1600 true Chr1: 4095246-4096845 Arabidopsis thaliana
AT1G12100 1.0kb downstream 1.0kb downstream 1000 false Chr1: 4095846-4096845 Arabidopsis thaliana
AT1G12100 2.0kb upstream 2.0kb upstream 2600 true Chr1: 4093246-4095845 Arabidopsis thaliana
AT1G12100 2.0kb upstream 2.0kb upstream 2000 false Chr1: 4093246-4095245 Arabidopsis thaliana
AT1G12100 2.0kb downstream 2.0kb downstream 2600 true Chr1: 4095246-4097845 Arabidopsis thaliana
AT1G12100 2.0kb downstream 2.0kb downstream 2000 false Chr1: 4095846-4097845 Arabidopsis thaliana
AT1G12100 5.0kb upstream 5.0kb upstream 5600 true Chr1: 4090246-4095845 Arabidopsis thaliana
AT1G12100 5.0kb upstream 5.0kb upstream 5000 false Chr1: 4090246-4095245 Arabidopsis thaliana
AT1G12100 5.0kb downstream 5.0kb downstream 5600 true Chr1: 4095246-4100845 Arabidopsis thaliana
AT1G12100 5.0kb downstream 5.0kb downstream 5000 false Chr1: 4095846-4100845 Arabidopsis thaliana
AT1G12100 10.0kb upstream 10.0kb upstream 10600 true Chr1: 4085246-4095845 Arabidopsis thaliana
AT1G12100 10.0kb upstream 10.0kb upstream 10000 false Chr1: 4085246-4095245 Arabidopsis thaliana
AT1G12100 10.0kb downstream 10.0kb downstream 10600 true Chr1: 4095246-4105845 Arabidopsis thaliana
AT1G12100 10.0kb downstream 10.0kb downstream 10000 false Chr1: 4095846-4105845 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378393 5261 Brassicaceae View MSA
123836784 5264 Brassicales-Malvales View MSA
124346794 5266 SBM View MSA
124246083 5268 Malvidae View MSA
124069364 5270 Rosid View MSA
123753397 5271 Pentapetalae View MSA
122797404 5272 Eudicot View MSA
122050019 5273 Angiosperm View MSA
123429239 5275 Viridiplantae View MSA
121311688 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.216     Low  
cufflinks 0.203     Low  
cufflinks 0.31       High
cufflinks 0.152     Low Low
cufflinks 0.166     Low  
cufflinks 0.345       High

0 Strain