Gene : AT1G11860 A. thaliana TAIR10
Defline:  (1 of 1) K00605 - aminomethyltransferase (gcvT, AMT) Genomic Order:  1165
Name:  ? AT1G11860 Secondary Identifier:  ? PAC:19651799
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana GLYCLEAV-PWY Arabidopsis thaliana pathologic  

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G11860 0.5kb upstream 0.5kb upstream 2830 true Chr1: 4000613-4003442 Arabidopsis thaliana
AT1G11860 0.5kb upstream 0.5kb upstream 500 false Chr1: 4000613-4001112 Arabidopsis thaliana
AT1G11860 0.5kb downstream 0.5kb downstream 2830 true Chr1: 4001113-4003942 Arabidopsis thaliana
AT1G11860 0.5kb downstream 0.5kb downstream 500 false Chr1: 4003443-4003942 Arabidopsis thaliana
AT1G11860 1.0kb upstream 1.0kb upstream 3330 true Chr1: 4000113-4003442 Arabidopsis thaliana
AT1G11860 1.0kb upstream 1.0kb upstream 1000 false Chr1: 4000113-4001112 Arabidopsis thaliana
AT1G11860 1.0kb downstream 1.0kb downstream 3330 true Chr1: 4001113-4004442 Arabidopsis thaliana
AT1G11860 1.0kb downstream 1.0kb downstream 1000 false Chr1: 4003443-4004442 Arabidopsis thaliana
AT1G11860 2.0kb upstream 2.0kb upstream 4330 true Chr1: 3999113-4003442 Arabidopsis thaliana
AT1G11860 2.0kb upstream 2.0kb upstream 2000 false Chr1: 3999113-4001112 Arabidopsis thaliana
AT1G11860 2.0kb downstream 2.0kb downstream 4330 true Chr1: 4001113-4005442 Arabidopsis thaliana
AT1G11860 2.0kb downstream 2.0kb downstream 2000 false Chr1: 4003443-4005442 Arabidopsis thaliana
AT1G11860 5.0kb upstream 5.0kb upstream 7330 true Chr1: 3996113-4003442 Arabidopsis thaliana
AT1G11860 5.0kb upstream 5.0kb upstream 5000 false Chr1: 3996113-4001112 Arabidopsis thaliana
AT1G11860 5.0kb downstream 5.0kb downstream 7330 true Chr1: 4001113-4008442 Arabidopsis thaliana
AT1G11860 5.0kb downstream 5.0kb downstream 5000 false Chr1: 4003443-4008442 Arabidopsis thaliana
AT1G11860 10.0kb upstream 10.0kb upstream 12330 true Chr1: 3991113-4003442 Arabidopsis thaliana
AT1G11860 10.0kb upstream 10.0kb upstream 10000 false Chr1: 3991113-4001112 Arabidopsis thaliana
AT1G11860 10.0kb downstream 10.0kb downstream 12330 true Chr1: 4001113-4013442 Arabidopsis thaliana
AT1G11860 10.0kb downstream 10.0kb downstream 10000 false Chr1: 4003443-4013442 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375304 5261 Brassicaceae View MSA
123834840 5264 Brassicales-Malvales View MSA
124337156 5266 SBM View MSA
124251126 5268 Malvidae View MSA
124063348 5270 Rosid View MSA
123743205 5271 Pentapetalae View MSA
122791059 5272 Eudicot View MSA
122045036 5273 Angiosperm View MSA
121345728 5274 Embryophyte View MSA
123424844 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 191.259     High High
cufflinks 19.963        
cufflinks 179.547     High  
cufflinks 21.073        
cufflinks 131.236     High  
cufflinks 21.425        

0 Strain