Gene : AT1G12050 A. thaliana TAIR10
Defline:  (1 of 1) 3.7.1.2 - Fumarylacetoacetase / Fumarylacetoacetate hydrolase Genomic Order:  1187
Name:  ? AT1G12050 Secondary Identifier:  ? PAC:19657782
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana TYRFUMCAT-PWY Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G12050 0.5kb upstream 0.5kb upstream 3956 true Chr1: 4072252-4076207 Arabidopsis thaliana
AT1G12050 0.5kb upstream 0.5kb upstream 500 false Chr1: 4072252-4072751 Arabidopsis thaliana
AT1G12050 0.5kb downstream 0.5kb downstream 3956 true Chr1: 4072752-4076707 Arabidopsis thaliana
AT1G12050 0.5kb downstream 0.5kb downstream 500 false Chr1: 4076208-4076707 Arabidopsis thaliana
AT1G12050 1.0kb upstream 1.0kb upstream 4456 true Chr1: 4071752-4076207 Arabidopsis thaliana
AT1G12050 1.0kb upstream 1.0kb upstream 1000 false Chr1: 4071752-4072751 Arabidopsis thaliana
AT1G12050 1.0kb downstream 1.0kb downstream 4456 true Chr1: 4072752-4077207 Arabidopsis thaliana
AT1G12050 1.0kb downstream 1.0kb downstream 1000 false Chr1: 4076208-4077207 Arabidopsis thaliana
AT1G12050 2.0kb upstream 2.0kb upstream 5456 true Chr1: 4070752-4076207 Arabidopsis thaliana
AT1G12050 2.0kb upstream 2.0kb upstream 2000 false Chr1: 4070752-4072751 Arabidopsis thaliana
AT1G12050 2.0kb downstream 2.0kb downstream 5456 true Chr1: 4072752-4078207 Arabidopsis thaliana
AT1G12050 2.0kb downstream 2.0kb downstream 2000 false Chr1: 4076208-4078207 Arabidopsis thaliana
AT1G12050 5.0kb upstream 5.0kb upstream 8456 true Chr1: 4067752-4076207 Arabidopsis thaliana
AT1G12050 5.0kb upstream 5.0kb upstream 5000 false Chr1: 4067752-4072751 Arabidopsis thaliana
AT1G12050 5.0kb downstream 5.0kb downstream 8456 true Chr1: 4072752-4081207 Arabidopsis thaliana
AT1G12050 5.0kb downstream 5.0kb downstream 5000 false Chr1: 4076208-4081207 Arabidopsis thaliana
AT1G12050 10.0kb upstream 10.0kb upstream 13456 true Chr1: 4062752-4076207 Arabidopsis thaliana
AT1G12050 10.0kb upstream 10.0kb upstream 10000 false Chr1: 4062752-4072751 Arabidopsis thaliana
AT1G12050 10.0kb downstream 10.0kb downstream 13456 true Chr1: 4072752-4086207 Arabidopsis thaliana
AT1G12050 10.0kb downstream 10.0kb downstream 10000 false Chr1: 4076208-4086207 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364829 5261 Brassicaceae View MSA
123835916 5264 Brassicales-Malvales View MSA
124338618 5266 SBM View MSA
124237542 5268 Malvidae View MSA
124064867 5270 Rosid View MSA
123751492 5271 Pentapetalae View MSA
122792638 5272 Eudicot View MSA
122047846 5273 Angiosperm View MSA
121345378 5274 Embryophyte View MSA
123424043 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.595        
cufflinks 10.543        
cufflinks 16.662        
cufflinks 12.627        
cufflinks 21.853       High
cufflinks 9.524       Low

0 Strain