Gene : ADT1 A. thaliana TAIR10
Primary Identifier:  ? AT1G11790 Defline:  (1 of 1) PTHR21022//PTHR21022:SF4 - PREPHENATE DEHYDRATASE P PROTEIN // AROGENATE DEHYDRATASE/PREPHENATE DEHYDRATASE 1, CHLOROPLASTIC
Genomic Order:  1159 Name:  ? AT1G11790
Secondary Identifier:  ? PAC:19656486
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-3462 Arabidopsis thaliana pathologic  
Athaliana PWY-3481 Arabidopsis thaliana pathologic  

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G11790 0.5kb upstream 0.5kb upstream 4468 true Chr1: 3980748-3985215 Arabidopsis thaliana
AT1G11790 0.5kb upstream 0.5kb upstream 500 false Chr1: 3980748-3981247 Arabidopsis thaliana
AT1G11790 0.5kb downstream 0.5kb downstream 4468 true Chr1: 3981248-3985715 Arabidopsis thaliana
AT1G11790 0.5kb downstream 0.5kb downstream 500 false Chr1: 3985216-3985715 Arabidopsis thaliana
AT1G11790 1.0kb upstream 1.0kb upstream 4968 true Chr1: 3980248-3985215 Arabidopsis thaliana
AT1G11790 1.0kb upstream 1.0kb upstream 1000 false Chr1: 3980248-3981247 Arabidopsis thaliana
AT1G11790 1.0kb downstream 1.0kb downstream 4968 true Chr1: 3981248-3986215 Arabidopsis thaliana
AT1G11790 1.0kb downstream 1.0kb downstream 1000 false Chr1: 3985216-3986215 Arabidopsis thaliana
AT1G11790 2.0kb upstream 2.0kb upstream 5968 true Chr1: 3979248-3985215 Arabidopsis thaliana
AT1G11790 2.0kb upstream 2.0kb upstream 2000 false Chr1: 3979248-3981247 Arabidopsis thaliana
AT1G11790 2.0kb downstream 2.0kb downstream 5968 true Chr1: 3981248-3987215 Arabidopsis thaliana
AT1G11790 2.0kb downstream 2.0kb downstream 2000 false Chr1: 3985216-3987215 Arabidopsis thaliana
AT1G11790 5.0kb upstream 5.0kb upstream 8968 true Chr1: 3976248-3985215 Arabidopsis thaliana
AT1G11790 5.0kb upstream 5.0kb upstream 5000 false Chr1: 3976248-3981247 Arabidopsis thaliana
AT1G11790 5.0kb downstream 5.0kb downstream 8968 true Chr1: 3981248-3990215 Arabidopsis thaliana
AT1G11790 5.0kb downstream 5.0kb downstream 5000 false Chr1: 3985216-3990215 Arabidopsis thaliana
AT1G11790 10.0kb upstream 10.0kb upstream 13968 true Chr1: 3971248-3985215 Arabidopsis thaliana
AT1G11790 10.0kb upstream 10.0kb upstream 10000 false Chr1: 3971248-3981247 Arabidopsis thaliana
AT1G11790 10.0kb downstream 10.0kb downstream 13968 true Chr1: 3981248-3995215 Arabidopsis thaliana
AT1G11790 10.0kb downstream 10.0kb downstream 10000 false Chr1: 3985216-3995215 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363320 5261 Brassicaceae View MSA
123840992 5264 Brassicales-Malvales View MSA
124349569 5266 SBM View MSA
124243895 5268 Malvidae View MSA
124070926 5270 Rosid View MSA
123746635 5271 Pentapetalae View MSA
122795634 5272 Eudicot View MSA
122042719 5273 Angiosperm View MSA
121351398 5274 Embryophyte View MSA
123427097 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.236       High
cufflinks 3.559        
cufflinks 3.277        
cufflinks 3.061        
cufflinks 2.751       Low
cufflinks 4.265       High

0 Strain