Gene : AT1G11660 A. thaliana TAIR10
Defline:  (1 of 1) PTHR19375:SF149 - HEAT SHOCK 70 KDA PROTEIN 16 Genomic Order:  1142
Name:  ? AT1G11660 Secondary Identifier:  ? PAC:19654087
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G11660 0.5kb upstream 0.5kb upstream 4513 true Chr1: 3920043-3924555 Arabidopsis thaliana
AT1G11660 0.5kb upstream 0.5kb upstream 500 false Chr1: 3920043-3920542 Arabidopsis thaliana
AT1G11660 0.5kb downstream 0.5kb downstream 4513 true Chr1: 3920543-3925055 Arabidopsis thaliana
AT1G11660 0.5kb downstream 0.5kb downstream 500 false Chr1: 3924556-3925055 Arabidopsis thaliana
AT1G11660 1.0kb upstream 1.0kb upstream 5013 true Chr1: 3919543-3924555 Arabidopsis thaliana
AT1G11660 1.0kb upstream 1.0kb upstream 1000 false Chr1: 3919543-3920542 Arabidopsis thaliana
AT1G11660 1.0kb downstream 1.0kb downstream 5013 true Chr1: 3920543-3925555 Arabidopsis thaliana
AT1G11660 1.0kb downstream 1.0kb downstream 1000 false Chr1: 3924556-3925555 Arabidopsis thaliana
AT1G11660 2.0kb upstream 2.0kb upstream 6013 true Chr1: 3918543-3924555 Arabidopsis thaliana
AT1G11660 2.0kb upstream 2.0kb upstream 2000 false Chr1: 3918543-3920542 Arabidopsis thaliana
AT1G11660 2.0kb downstream 2.0kb downstream 6013 true Chr1: 3920543-3926555 Arabidopsis thaliana
AT1G11660 2.0kb downstream 2.0kb downstream 2000 false Chr1: 3924556-3926555 Arabidopsis thaliana
AT1G11660 5.0kb upstream 5.0kb upstream 9013 true Chr1: 3915543-3924555 Arabidopsis thaliana
AT1G11660 5.0kb upstream 5.0kb upstream 5000 false Chr1: 3915543-3920542 Arabidopsis thaliana
AT1G11660 5.0kb downstream 5.0kb downstream 9013 true Chr1: 3920543-3929555 Arabidopsis thaliana
AT1G11660 5.0kb downstream 5.0kb downstream 5000 false Chr1: 3924556-3929555 Arabidopsis thaliana
AT1G11660 10.0kb upstream 10.0kb upstream 14013 true Chr1: 3910543-3924555 Arabidopsis thaliana
AT1G11660 10.0kb upstream 10.0kb upstream 10000 false Chr1: 3910543-3920542 Arabidopsis thaliana
AT1G11660 10.0kb downstream 10.0kb downstream 14013 true Chr1: 3920543-3934555 Arabidopsis thaliana
AT1G11660 10.0kb downstream 10.0kb downstream 10000 false Chr1: 3924556-3934555 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372801 5261 Brassicaceae View MSA
123835805 5264 Brassicales-Malvales View MSA
124348018 5266 SBM View MSA
124244395 5268 Malvidae View MSA
124062320 5270 Rosid View MSA
123739361 5271 Pentapetalae View MSA
122788310 5272 Eudicot View MSA
122048568 5273 Angiosperm View MSA
121311023 5274 Embryophyte View MSA
123348380 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.872        
cufflinks 14.711        
cufflinks 10.664       Low
cufflinks 14.862        
cufflinks 11.132        
cufflinks 15.482       High

0 Strain