Gene : AT1G11410 A. thaliana TAIR10
Defline:  (1 of 2) PTHR27002//PTHR27002:SF100 - FAMILY NOT NAMED // G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RKS1 Genomic Order:  1113
Name:  ? AT1G11410 Secondary Identifier:  ? PAC:19651658
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G11410 0.5kb upstream 0.5kb upstream 3647 true Chr1: 3840786-3844432 Arabidopsis thaliana
AT1G11410 0.5kb upstream 0.5kb upstream 500 false Chr1: 3840786-3841285 Arabidopsis thaliana
AT1G11410 0.5kb downstream 0.5kb downstream 3647 true Chr1: 3841286-3844932 Arabidopsis thaliana
AT1G11410 0.5kb downstream 0.5kb downstream 500 false Chr1: 3844433-3844932 Arabidopsis thaliana
AT1G11410 1.0kb upstream 1.0kb upstream 4147 true Chr1: 3840286-3844432 Arabidopsis thaliana
AT1G11410 1.0kb upstream 1.0kb upstream 1000 false Chr1: 3840286-3841285 Arabidopsis thaliana
AT1G11410 1.0kb downstream 1.0kb downstream 4147 true Chr1: 3841286-3845432 Arabidopsis thaliana
AT1G11410 1.0kb downstream 1.0kb downstream 1000 false Chr1: 3844433-3845432 Arabidopsis thaliana
AT1G11410 2.0kb upstream 2.0kb upstream 5147 true Chr1: 3839286-3844432 Arabidopsis thaliana
AT1G11410 2.0kb upstream 2.0kb upstream 2000 false Chr1: 3839286-3841285 Arabidopsis thaliana
AT1G11410 2.0kb downstream 2.0kb downstream 5147 true Chr1: 3841286-3846432 Arabidopsis thaliana
AT1G11410 2.0kb downstream 2.0kb downstream 2000 false Chr1: 3844433-3846432 Arabidopsis thaliana
AT1G11410 5.0kb upstream 5.0kb upstream 8147 true Chr1: 3836286-3844432 Arabidopsis thaliana
AT1G11410 5.0kb upstream 5.0kb upstream 5000 false Chr1: 3836286-3841285 Arabidopsis thaliana
AT1G11410 5.0kb downstream 5.0kb downstream 8147 true Chr1: 3841286-3849432 Arabidopsis thaliana
AT1G11410 5.0kb downstream 5.0kb downstream 5000 false Chr1: 3844433-3849432 Arabidopsis thaliana
AT1G11410 10.0kb upstream 10.0kb upstream 13147 true Chr1: 3831286-3844432 Arabidopsis thaliana
AT1G11410 10.0kb upstream 10.0kb upstream 10000 false Chr1: 3831286-3841285 Arabidopsis thaliana
AT1G11410 10.0kb downstream 10.0kb downstream 13147 true Chr1: 3841286-3854432 Arabidopsis thaliana
AT1G11410 10.0kb downstream 10.0kb downstream 10000 false Chr1: 3844433-3854432 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360490 5261 Brassicaceae View MSA
123831996 5264 Brassicales-Malvales View MSA
124338023 5266 SBM View MSA
124251475 5268 Malvidae View MSA
124074937 5270 Rosid View MSA
123753765 5271 Pentapetalae View MSA
122797900 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.245       High
cufflinks 3.333        
cufflinks 6.546        
cufflinks 4.276        
cufflinks 5.323        
cufflinks 2.729       Low

0 Strain