Gene : NRPB10 A. thaliana TAIR10
Primary Identifier:  ? AT1G11475 Defline:  (1 of 2) K03007 - DNA-directed RNA polymerases I, II, and III subunit RPABC5 (RPB10, POLR2L)
Genomic Order:  1120 Name:  ? AT1G11475
Secondary Identifier:  ? PAC:19649962
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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G11475 0.5kb upstream 0.5kb upstream 2132 true Chr1: 3861899-3864030 Arabidopsis thaliana
AT1G11475 0.5kb upstream 0.5kb upstream 500 false Chr1: 3861899-3862398 Arabidopsis thaliana
AT1G11475 0.5kb downstream 0.5kb downstream 2132 true Chr1: 3862399-3864530 Arabidopsis thaliana
AT1G11475 0.5kb downstream 0.5kb downstream 500 false Chr1: 3864031-3864530 Arabidopsis thaliana
AT1G11475 1.0kb upstream 1.0kb upstream 2632 true Chr1: 3861399-3864030 Arabidopsis thaliana
AT1G11475 1.0kb upstream 1.0kb upstream 1000 false Chr1: 3861399-3862398 Arabidopsis thaliana
AT1G11475 1.0kb downstream 1.0kb downstream 2632 true Chr1: 3862399-3865030 Arabidopsis thaliana
AT1G11475 1.0kb downstream 1.0kb downstream 1000 false Chr1: 3864031-3865030 Arabidopsis thaliana
AT1G11475 2.0kb upstream 2.0kb upstream 3632 true Chr1: 3860399-3864030 Arabidopsis thaliana
AT1G11475 2.0kb upstream 2.0kb upstream 2000 false Chr1: 3860399-3862398 Arabidopsis thaliana
AT1G11475 2.0kb downstream 2.0kb downstream 3632 true Chr1: 3862399-3866030 Arabidopsis thaliana
AT1G11475 2.0kb downstream 2.0kb downstream 2000 false Chr1: 3864031-3866030 Arabidopsis thaliana
AT1G11475 5.0kb upstream 5.0kb upstream 6632 true Chr1: 3857399-3864030 Arabidopsis thaliana
AT1G11475 5.0kb upstream 5.0kb upstream 5000 false Chr1: 3857399-3862398 Arabidopsis thaliana
AT1G11475 5.0kb downstream 5.0kb downstream 6632 true Chr1: 3862399-3869030 Arabidopsis thaliana
AT1G11475 5.0kb downstream 5.0kb downstream 5000 false Chr1: 3864031-3869030 Arabidopsis thaliana
AT1G11475 10.0kb upstream 10.0kb upstream 11632 true Chr1: 3852399-3864030 Arabidopsis thaliana
AT1G11475 10.0kb upstream 10.0kb upstream 10000 false Chr1: 3852399-3862398 Arabidopsis thaliana
AT1G11475 10.0kb downstream 10.0kb downstream 11632 true Chr1: 3862399-3874030 Arabidopsis thaliana
AT1G11475 10.0kb downstream 10.0kb downstream 10000 false Chr1: 3864031-3874030 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367130 5261 Brassicaceae View MSA
123839063 5264 Brassicales-Malvales View MSA
124322546 5266 SBM View MSA
124251410 5268 Malvidae View MSA
124064582 5270 Rosid View MSA
123736869 5271 Pentapetalae View MSA
122788474 5272 Eudicot View MSA
122046178 5273 Angiosperm View MSA
121344110 5274 Embryophyte View MSA
123424802 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.342        
cufflinks 11.232        
cufflinks 9.151        
cufflinks 10.728        
cufflinks 8.356       Low
cufflinks 11.567       High

0 Strain