Gene : AT1G11390 A. thaliana TAIR10
Defline:  (1 of 2) PTHR10566//PTHR10566:SF93 - CHAPERONE-ACTIVITY OF BC1 COMPLEX CABC1 -RELATED // SUBFAMILY NOT NAMED Genomic Order:  1111
Name:  ? AT1G11390 Secondary Identifier:  ? PAC:19654793
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G11390 0.5kb upstream 0.5kb upstream 3671 true Chr1: 3834459-3838129 Arabidopsis thaliana
AT1G11390 0.5kb upstream 0.5kb upstream 500 false Chr1: 3837630-3838129 Arabidopsis thaliana
AT1G11390 0.5kb downstream 0.5kb downstream 3671 true Chr1: 3833959-3837629 Arabidopsis thaliana
AT1G11390 0.5kb downstream 0.5kb downstream 500 false Chr1: 3833959-3834458 Arabidopsis thaliana
AT1G11390 1.0kb upstream 1.0kb upstream 4171 true Chr1: 3834459-3838629 Arabidopsis thaliana
AT1G11390 1.0kb upstream 1.0kb upstream 1000 false Chr1: 3837630-3838629 Arabidopsis thaliana
AT1G11390 1.0kb downstream 1.0kb downstream 4171 true Chr1: 3833459-3837629 Arabidopsis thaliana
AT1G11390 1.0kb downstream 1.0kb downstream 1000 false Chr1: 3833459-3834458 Arabidopsis thaliana
AT1G11390 2.0kb upstream 2.0kb upstream 5171 true Chr1: 3834459-3839629 Arabidopsis thaliana
AT1G11390 2.0kb upstream 2.0kb upstream 2000 false Chr1: 3837630-3839629 Arabidopsis thaliana
AT1G11390 2.0kb downstream 2.0kb downstream 5171 true Chr1: 3832459-3837629 Arabidopsis thaliana
AT1G11390 2.0kb downstream 2.0kb downstream 2000 false Chr1: 3832459-3834458 Arabidopsis thaliana
AT1G11390 5.0kb upstream 5.0kb upstream 8171 true Chr1: 3834459-3842629 Arabidopsis thaliana
AT1G11390 5.0kb upstream 5.0kb upstream 5000 false Chr1: 3837630-3842629 Arabidopsis thaliana
AT1G11390 5.0kb downstream 5.0kb downstream 8171 true Chr1: 3829459-3837629 Arabidopsis thaliana
AT1G11390 5.0kb downstream 5.0kb downstream 5000 false Chr1: 3829459-3834458 Arabidopsis thaliana
AT1G11390 10.0kb upstream 10.0kb upstream 13171 true Chr1: 3834459-3847629 Arabidopsis thaliana
AT1G11390 10.0kb upstream 10.0kb upstream 10000 false Chr1: 3837630-3847629 Arabidopsis thaliana
AT1G11390 10.0kb downstream 10.0kb downstream 13171 true Chr1: 3824459-3837629 Arabidopsis thaliana
AT1G11390 10.0kb downstream 10.0kb downstream 10000 false Chr1: 3824459-3834458 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371185 5261 Brassicaceae View MSA
123832450 5264 Brassicales-Malvales View MSA
124343453 5266 SBM View MSA
124248688 5268 Malvidae View MSA
124066651 5270 Rosid View MSA
123751208 5271 Pentapetalae View MSA
122797735 5272 Eudicot View MSA
122043373 5273 Angiosperm View MSA
121343858 5274 Embryophyte View MSA
123428037 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.268        
cufflinks 7.41        
cufflinks 5.209       Low
cufflinks 7.982        
cufflinks 5.736        
cufflinks 9.191       High

0 Strain