Gene : AT1G10780 A. thaliana TAIR10
Defline:  (1 of 47) PF12937 - F-box-like (F-box-like) Genomic Order:  1050
Name:  ? AT1G10780 Secondary Identifier:  ? PAC:19655543
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G10780 0.5kb upstream 0.5kb upstream 2832 true Chr1: 3592746-3595577 Arabidopsis thaliana
AT1G10780 0.5kb upstream 0.5kb upstream 500 false Chr1: 3595078-3595577 Arabidopsis thaliana
AT1G10780 0.5kb downstream 0.5kb downstream 2832 true Chr1: 3592246-3595077 Arabidopsis thaliana
AT1G10780 0.5kb downstream 0.5kb downstream 500 false Chr1: 3592246-3592745 Arabidopsis thaliana
AT1G10780 1.0kb upstream 1.0kb upstream 3332 true Chr1: 3592746-3596077 Arabidopsis thaliana
AT1G10780 1.0kb upstream 1.0kb upstream 1000 false Chr1: 3595078-3596077 Arabidopsis thaliana
AT1G10780 1.0kb downstream 1.0kb downstream 3332 true Chr1: 3591746-3595077 Arabidopsis thaliana
AT1G10780 1.0kb downstream 1.0kb downstream 1000 false Chr1: 3591746-3592745 Arabidopsis thaliana
AT1G10780 2.0kb upstream 2.0kb upstream 4332 true Chr1: 3592746-3597077 Arabidopsis thaliana
AT1G10780 2.0kb upstream 2.0kb upstream 2000 false Chr1: 3595078-3597077 Arabidopsis thaliana
AT1G10780 2.0kb downstream 2.0kb downstream 4332 true Chr1: 3590746-3595077 Arabidopsis thaliana
AT1G10780 2.0kb downstream 2.0kb downstream 2000 false Chr1: 3590746-3592745 Arabidopsis thaliana
AT1G10780 5.0kb upstream 5.0kb upstream 7332 true Chr1: 3592746-3600077 Arabidopsis thaliana
AT1G10780 5.0kb upstream 5.0kb upstream 5000 false Chr1: 3595078-3600077 Arabidopsis thaliana
AT1G10780 5.0kb downstream 5.0kb downstream 7332 true Chr1: 3587746-3595077 Arabidopsis thaliana
AT1G10780 5.0kb downstream 5.0kb downstream 5000 false Chr1: 3587746-3592745 Arabidopsis thaliana
AT1G10780 10.0kb upstream 10.0kb upstream 12332 true Chr1: 3592746-3605077 Arabidopsis thaliana
AT1G10780 10.0kb upstream 10.0kb upstream 10000 false Chr1: 3595078-3605077 Arabidopsis thaliana
AT1G10780 10.0kb downstream 10.0kb downstream 12332 true Chr1: 3582746-3595077 Arabidopsis thaliana
AT1G10780 10.0kb downstream 10.0kb downstream 10000 false Chr1: 3582746-3592745 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361692 5261 Brassicaceae View MSA
123835233 5264 Brassicales-Malvales View MSA
124337934 5266 SBM View MSA
124239101 5268 Malvidae View MSA
124060809 5270 Rosid View MSA
123751909 5271 Pentapetalae View MSA
122785803 5272 Eudicot View MSA
122045845 5273 Angiosperm View MSA
121351679 5274 Embryophyte View MSA
123382274 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.612        
cufflinks 3.53        
cufflinks 1.001        
cufflinks 3.646        
cufflinks 0.83       Low
cufflinks 5.554       High

0 Strain