Gene : AT1G10585 A. thaliana TAIR10
Defline:  (1 of 2) PTHR13935:SF53 - BASIC HELIX-LOOP-HELIX DOMAIN-CONTAINING PROTEIN Genomic Order:  1023
Name:  ? AT1G10585 Secondary Identifier:  ? PAC:19649560
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G10585 0.5kb upstream 0.5kb upstream 1705 true Chr1: 3493940-3495644 Arabidopsis thaliana
AT1G10585 0.5kb upstream 0.5kb upstream 500 false Chr1: 3495145-3495644 Arabidopsis thaliana
AT1G10585 0.5kb downstream 0.5kb downstream 1705 true Chr1: 3493440-3495144 Arabidopsis thaliana
AT1G10585 0.5kb downstream 0.5kb downstream 500 false Chr1: 3493440-3493939 Arabidopsis thaliana
AT1G10585 1.0kb upstream 1.0kb upstream 2205 true Chr1: 3493940-3496144 Arabidopsis thaliana
AT1G10585 1.0kb upstream 1.0kb upstream 1000 false Chr1: 3495145-3496144 Arabidopsis thaliana
AT1G10585 1.0kb downstream 1.0kb downstream 2205 true Chr1: 3492940-3495144 Arabidopsis thaliana
AT1G10585 1.0kb downstream 1.0kb downstream 1000 false Chr1: 3492940-3493939 Arabidopsis thaliana
AT1G10585 2.0kb upstream 2.0kb upstream 3205 true Chr1: 3493940-3497144 Arabidopsis thaliana
AT1G10585 2.0kb upstream 2.0kb upstream 2000 false Chr1: 3495145-3497144 Arabidopsis thaliana
AT1G10585 2.0kb downstream 2.0kb downstream 3205 true Chr1: 3491940-3495144 Arabidopsis thaliana
AT1G10585 2.0kb downstream 2.0kb downstream 2000 false Chr1: 3491940-3493939 Arabidopsis thaliana
AT1G10585 5.0kb upstream 5.0kb upstream 6205 true Chr1: 3493940-3500144 Arabidopsis thaliana
AT1G10585 5.0kb upstream 5.0kb upstream 5000 false Chr1: 3495145-3500144 Arabidopsis thaliana
AT1G10585 5.0kb downstream 5.0kb downstream 6205 true Chr1: 3488940-3495144 Arabidopsis thaliana
AT1G10585 5.0kb downstream 5.0kb downstream 5000 false Chr1: 3488940-3493939 Arabidopsis thaliana
AT1G10585 10.0kb upstream 10.0kb upstream 11205 true Chr1: 3493940-3505144 Arabidopsis thaliana
AT1G10585 10.0kb upstream 10.0kb upstream 10000 false Chr1: 3495145-3505144 Arabidopsis thaliana
AT1G10585 10.0kb downstream 10.0kb downstream 11205 true Chr1: 3483940-3495144 Arabidopsis thaliana
AT1G10585 10.0kb downstream 10.0kb downstream 10000 false Chr1: 3483940-3493939 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040931 5273 Angiosperm View MSA
122379123 5261 Brassicaceae View MSA
123835451 5264 Brassicales-Malvales View MSA
124339412 5266 SBM View MSA
124249700 5268 Malvidae View MSA
124071186 5270 Rosid View MSA
123742697 5271 Pentapetalae View MSA
122795033 5272 Eudicot View MSA
121309769 5274 Embryophyte View MSA
123347432 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.474        
cufflinks 0.025     Low Low
cufflinks 1.308        
cufflinks 0.262     Low  
cufflinks 2.361       High
cufflinks 0.014     Low Low

0 Strain