Gene : OTS2 A. thaliana TAIR10
Primary Identifier:  ? AT1G10570 Defline:  (1 of 2) K16287 - ubiquitin-like-specific protease 1C/D [EC:3.4.22.68] (ULP1C_D)
Genomic Order:  1021 Name:  ? AT1G10570
Secondary Identifier:  ? PAC:19651957
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G10570 0.5kb upstream 0.5kb upstream 4194 true Chr1: 3487084-3491277 Arabidopsis thaliana
AT1G10570 0.5kb upstream 0.5kb upstream 500 false Chr1: 3487084-3487583 Arabidopsis thaliana
AT1G10570 0.5kb downstream 0.5kb downstream 4194 true Chr1: 3487584-3491777 Arabidopsis thaliana
AT1G10570 0.5kb downstream 0.5kb downstream 500 false Chr1: 3491278-3491777 Arabidopsis thaliana
AT1G10570 1.0kb upstream 1.0kb upstream 4694 true Chr1: 3486584-3491277 Arabidopsis thaliana
AT1G10570 1.0kb upstream 1.0kb upstream 1000 false Chr1: 3486584-3487583 Arabidopsis thaliana
AT1G10570 1.0kb downstream 1.0kb downstream 4694 true Chr1: 3487584-3492277 Arabidopsis thaliana
AT1G10570 1.0kb downstream 1.0kb downstream 1000 false Chr1: 3491278-3492277 Arabidopsis thaliana
AT1G10570 2.0kb upstream 2.0kb upstream 5694 true Chr1: 3485584-3491277 Arabidopsis thaliana
AT1G10570 2.0kb upstream 2.0kb upstream 2000 false Chr1: 3485584-3487583 Arabidopsis thaliana
AT1G10570 2.0kb downstream 2.0kb downstream 5694 true Chr1: 3487584-3493277 Arabidopsis thaliana
AT1G10570 2.0kb downstream 2.0kb downstream 2000 false Chr1: 3491278-3493277 Arabidopsis thaliana
AT1G10570 5.0kb upstream 5.0kb upstream 8694 true Chr1: 3482584-3491277 Arabidopsis thaliana
AT1G10570 5.0kb upstream 5.0kb upstream 5000 false Chr1: 3482584-3487583 Arabidopsis thaliana
AT1G10570 5.0kb downstream 5.0kb downstream 8694 true Chr1: 3487584-3496277 Arabidopsis thaliana
AT1G10570 5.0kb downstream 5.0kb downstream 5000 false Chr1: 3491278-3496277 Arabidopsis thaliana
AT1G10570 10.0kb upstream 10.0kb upstream 13694 true Chr1: 3477584-3491277 Arabidopsis thaliana
AT1G10570 10.0kb upstream 10.0kb upstream 10000 false Chr1: 3477584-3487583 Arabidopsis thaliana
AT1G10570 10.0kb downstream 10.0kb downstream 13694 true Chr1: 3487584-3501277 Arabidopsis thaliana
AT1G10570 10.0kb downstream 10.0kb downstream 10000 false Chr1: 3491278-3501277 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122792436 5272 Eudicot View MSA
122362786 5261 Brassicaceae View MSA
123798427 5264 Brassicales-Malvales View MSA
124296062 5266 SBM View MSA
124243948 5268 Malvidae View MSA
124050404 5270 Rosid View MSA
123747374 5271 Pentapetalae View MSA
122047902 5273 Angiosperm View MSA
123429184 5275 Viridiplantae View MSA
121351646 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.955       Low
cufflinks 7.563       High
cufflinks 4.89        
cufflinks 6.596        
cufflinks 4.116        
cufflinks 5.237        

0 Strain