Gene : AT1G10340 A. thaliana TAIR10
Defline:  (1 of 7) PTHR24177:SF18 - ANKYRIN REPEAT FAMILY PROTEIN-RELATED Genomic Order:  996
Name:  ? AT1G10340 Secondary Identifier:  ? PAC:19658056
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G10340 0.5kb upstream 0.5kb upstream 2750 true Chr1: 3390322-3393071 Arabidopsis thaliana
AT1G10340 0.5kb upstream 0.5kb upstream 500 false Chr1: 3392572-3393071 Arabidopsis thaliana
AT1G10340 0.5kb downstream 0.5kb downstream 2750 true Chr1: 3389822-3392571 Arabidopsis thaliana
AT1G10340 0.5kb downstream 0.5kb downstream 500 false Chr1: 3389822-3390321 Arabidopsis thaliana
AT1G10340 1.0kb upstream 1.0kb upstream 3250 true Chr1: 3390322-3393571 Arabidopsis thaliana
AT1G10340 1.0kb upstream 1.0kb upstream 1000 false Chr1: 3392572-3393571 Arabidopsis thaliana
AT1G10340 1.0kb downstream 1.0kb downstream 3250 true Chr1: 3389322-3392571 Arabidopsis thaliana
AT1G10340 1.0kb downstream 1.0kb downstream 1000 false Chr1: 3389322-3390321 Arabidopsis thaliana
AT1G10340 2.0kb upstream 2.0kb upstream 4250 true Chr1: 3390322-3394571 Arabidopsis thaliana
AT1G10340 2.0kb upstream 2.0kb upstream 2000 false Chr1: 3392572-3394571 Arabidopsis thaliana
AT1G10340 2.0kb downstream 2.0kb downstream 4250 true Chr1: 3388322-3392571 Arabidopsis thaliana
AT1G10340 2.0kb downstream 2.0kb downstream 2000 false Chr1: 3388322-3390321 Arabidopsis thaliana
AT1G10340 5.0kb upstream 5.0kb upstream 7250 true Chr1: 3390322-3397571 Arabidopsis thaliana
AT1G10340 5.0kb upstream 5.0kb upstream 5000 false Chr1: 3392572-3397571 Arabidopsis thaliana
AT1G10340 5.0kb downstream 5.0kb downstream 7250 true Chr1: 3385322-3392571 Arabidopsis thaliana
AT1G10340 5.0kb downstream 5.0kb downstream 5000 false Chr1: 3385322-3390321 Arabidopsis thaliana
AT1G10340 10.0kb upstream 10.0kb upstream 12250 true Chr1: 3390322-3402571 Arabidopsis thaliana
AT1G10340 10.0kb upstream 10.0kb upstream 10000 false Chr1: 3392572-3402571 Arabidopsis thaliana
AT1G10340 10.0kb downstream 10.0kb downstream 12250 true Chr1: 3380322-3392571 Arabidopsis thaliana
AT1G10340 10.0kb downstream 10.0kb downstream 10000 false Chr1: 3380322-3390321 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377101 5261 Brassicaceae View MSA
123841494 5264 Brassicales-Malvales View MSA
124350125 5266 SBM View MSA
124252688 5268 Malvidae View MSA
124074725 5270 Rosid View MSA
123753624 5271 Pentapetalae View MSA
122797775 5272 Eudicot View MSA
122051097 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351705 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.337       High
cufflinks 0.748        
cufflinks 0.963        
cufflinks 1.212        
cufflinks 1.875        
cufflinks 1.293        

0 Strain