Gene : AT1G10180 A. thaliana TAIR10
Defline:  (1 of 1) PTHR21426:SF2 - EXOCYST COMPLEX COMPONENT EXO84C Genomic Order:  981
Name:  ? AT1G10180 Secondary Identifier:  ? PAC:19651151
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G10180 0.5kb upstream 0.5kb upstream 3806 true Chr1: 3338303-3342108 Arabidopsis thaliana
AT1G10180 0.5kb upstream 0.5kb upstream 500 false Chr1: 3341609-3342108 Arabidopsis thaliana
AT1G10180 0.5kb downstream 0.5kb downstream 3806 true Chr1: 3337803-3341608 Arabidopsis thaliana
AT1G10180 0.5kb downstream 0.5kb downstream 500 false Chr1: 3337803-3338302 Arabidopsis thaliana
AT1G10180 1.0kb upstream 1.0kb upstream 4306 true Chr1: 3338303-3342608 Arabidopsis thaliana
AT1G10180 1.0kb upstream 1.0kb upstream 1000 false Chr1: 3341609-3342608 Arabidopsis thaliana
AT1G10180 1.0kb downstream 1.0kb downstream 4306 true Chr1: 3337303-3341608 Arabidopsis thaliana
AT1G10180 1.0kb downstream 1.0kb downstream 1000 false Chr1: 3337303-3338302 Arabidopsis thaliana
AT1G10180 2.0kb upstream 2.0kb upstream 5306 true Chr1: 3338303-3343608 Arabidopsis thaliana
AT1G10180 2.0kb upstream 2.0kb upstream 2000 false Chr1: 3341609-3343608 Arabidopsis thaliana
AT1G10180 2.0kb downstream 2.0kb downstream 5306 true Chr1: 3336303-3341608 Arabidopsis thaliana
AT1G10180 2.0kb downstream 2.0kb downstream 2000 false Chr1: 3336303-3338302 Arabidopsis thaliana
AT1G10180 5.0kb upstream 5.0kb upstream 8306 true Chr1: 3338303-3346608 Arabidopsis thaliana
AT1G10180 5.0kb upstream 5.0kb upstream 5000 false Chr1: 3341609-3346608 Arabidopsis thaliana
AT1G10180 5.0kb downstream 5.0kb downstream 8306 true Chr1: 3333303-3341608 Arabidopsis thaliana
AT1G10180 5.0kb downstream 5.0kb downstream 5000 false Chr1: 3333303-3338302 Arabidopsis thaliana
AT1G10180 10.0kb upstream 10.0kb upstream 13306 true Chr1: 3338303-3351608 Arabidopsis thaliana
AT1G10180 10.0kb upstream 10.0kb upstream 10000 false Chr1: 3341609-3351608 Arabidopsis thaliana
AT1G10180 10.0kb downstream 10.0kb downstream 13306 true Chr1: 3328303-3341608 Arabidopsis thaliana
AT1G10180 10.0kb downstream 10.0kb downstream 10000 false Chr1: 3328303-3338302 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365049 5261 Brassicaceae View MSA
123832773 5264 Brassicales-Malvales View MSA
124344137 5266 SBM View MSA
124241633 5268 Malvidae View MSA
124065618 5270 Rosid View MSA
123739809 5271 Pentapetalae View MSA
122787186 5272 Eudicot View MSA
122042484 5273 Angiosperm View MSA
121309976 5274 Embryophyte View MSA
123347590 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.148        
cufflinks 13.782        
cufflinks 5.977        
cufflinks 14.446       High
cufflinks 6.255        
cufflinks 13.173        

0 Strain