Gene : AT1G10090 A. thaliana TAIR10
Defline:  (1 of 1) PTHR13018//PTHR13018:SF31 - PROBABLE MEMBRANE PROTEIN DUF221-RELATED // LIPASE/HYDROLASE Genomic Order:  971
Name:  ? AT1G10090 Secondary Identifier:  ? PAC:19656749
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G10090 0.5kb upstream 0.5kb upstream 6388 true Chr1: 3290311-3296698 Arabidopsis thaliana
AT1G10090 0.5kb upstream 0.5kb upstream 500 false Chr1: 3296199-3296698 Arabidopsis thaliana
AT1G10090 0.5kb downstream 0.5kb downstream 6388 true Chr1: 3289811-3296198 Arabidopsis thaliana
AT1G10090 0.5kb downstream 0.5kb downstream 500 false Chr1: 3289811-3290310 Arabidopsis thaliana
AT1G10090 1.0kb upstream 1.0kb upstream 6888 true Chr1: 3290311-3297198 Arabidopsis thaliana
AT1G10090 1.0kb upstream 1.0kb upstream 1000 false Chr1: 3296199-3297198 Arabidopsis thaliana
AT1G10090 1.0kb downstream 1.0kb downstream 6888 true Chr1: 3289311-3296198 Arabidopsis thaliana
AT1G10090 1.0kb downstream 1.0kb downstream 1000 false Chr1: 3289311-3290310 Arabidopsis thaliana
AT1G10090 2.0kb upstream 2.0kb upstream 7888 true Chr1: 3290311-3298198 Arabidopsis thaliana
AT1G10090 2.0kb upstream 2.0kb upstream 2000 false Chr1: 3296199-3298198 Arabidopsis thaliana
AT1G10090 2.0kb downstream 2.0kb downstream 7888 true Chr1: 3288311-3296198 Arabidopsis thaliana
AT1G10090 2.0kb downstream 2.0kb downstream 2000 false Chr1: 3288311-3290310 Arabidopsis thaliana
AT1G10090 5.0kb upstream 5.0kb upstream 10888 true Chr1: 3290311-3301198 Arabidopsis thaliana
AT1G10090 5.0kb upstream 5.0kb upstream 5000 false Chr1: 3296199-3301198 Arabidopsis thaliana
AT1G10090 5.0kb downstream 5.0kb downstream 10888 true Chr1: 3285311-3296198 Arabidopsis thaliana
AT1G10090 5.0kb downstream 5.0kb downstream 5000 false Chr1: 3285311-3290310 Arabidopsis thaliana
AT1G10090 10.0kb upstream 10.0kb upstream 15888 true Chr1: 3290311-3306198 Arabidopsis thaliana
AT1G10090 10.0kb upstream 10.0kb upstream 10000 false Chr1: 3296199-3306198 Arabidopsis thaliana
AT1G10090 10.0kb downstream 10.0kb downstream 15888 true Chr1: 3280311-3296198 Arabidopsis thaliana
AT1G10090 10.0kb downstream 10.0kb downstream 10000 false Chr1: 3280311-3290310 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375288 5261 Brassicaceae View MSA
123836607 5264 Brassicales-Malvales View MSA
124350426 5266 SBM View MSA
124241508 5268 Malvidae View MSA
124066358 5270 Rosid View MSA
123746920 5271 Pentapetalae View MSA
122790536 5272 Eudicot View MSA
122043490 5273 Angiosperm View MSA
123429118 5275 Viridiplantae View MSA
121349616 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.734       Low
cufflinks 16.175        
cufflinks 12.309        
cufflinks 14.008        
cufflinks 13.223        
cufflinks 16.442       High

0 Strain