Gene : HEMA2 A. thaliana TAIR10
Primary Identifier:  ? AT1G09940 Defline:  (1 of 3) 1.2.1.70 - Glutamyl-tRNA reductase
Genomic Order:  957 Name:  ? AT1G09940
Secondary Identifier:  ? PAC:19650202
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-5188 Arabidopsis thaliana pathologic  
Athaliana PWY-5918 Arabidopsis thaliana pathologic  

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G09940 0.5kb upstream 0.5kb upstream 3060 true Chr1: 3236995-3240054 Arabidopsis thaliana
AT1G09940 0.5kb upstream 0.5kb upstream 500 false Chr1: 3239555-3240054 Arabidopsis thaliana
AT1G09940 0.5kb downstream 0.5kb downstream 3060 true Chr1: 3236495-3239554 Arabidopsis thaliana
AT1G09940 0.5kb downstream 0.5kb downstream 500 false Chr1: 3236495-3236994 Arabidopsis thaliana
AT1G09940 1.0kb upstream 1.0kb upstream 3560 true Chr1: 3236995-3240554 Arabidopsis thaliana
AT1G09940 1.0kb upstream 1.0kb upstream 1000 false Chr1: 3239555-3240554 Arabidopsis thaliana
AT1G09940 1.0kb downstream 1.0kb downstream 3560 true Chr1: 3235995-3239554 Arabidopsis thaliana
AT1G09940 1.0kb downstream 1.0kb downstream 1000 false Chr1: 3235995-3236994 Arabidopsis thaliana
AT1G09940 2.0kb upstream 2.0kb upstream 4560 true Chr1: 3236995-3241554 Arabidopsis thaliana
AT1G09940 2.0kb upstream 2.0kb upstream 2000 false Chr1: 3239555-3241554 Arabidopsis thaliana
AT1G09940 2.0kb downstream 2.0kb downstream 4560 true Chr1: 3234995-3239554 Arabidopsis thaliana
AT1G09940 2.0kb downstream 2.0kb downstream 2000 false Chr1: 3234995-3236994 Arabidopsis thaliana
AT1G09940 5.0kb upstream 5.0kb upstream 7560 true Chr1: 3236995-3244554 Arabidopsis thaliana
AT1G09940 5.0kb upstream 5.0kb upstream 5000 false Chr1: 3239555-3244554 Arabidopsis thaliana
AT1G09940 5.0kb downstream 5.0kb downstream 7560 true Chr1: 3231995-3239554 Arabidopsis thaliana
AT1G09940 5.0kb downstream 5.0kb downstream 5000 false Chr1: 3231995-3236994 Arabidopsis thaliana
AT1G09940 10.0kb upstream 10.0kb upstream 12560 true Chr1: 3236995-3249554 Arabidopsis thaliana
AT1G09940 10.0kb upstream 10.0kb upstream 10000 false Chr1: 3239555-3249554 Arabidopsis thaliana
AT1G09940 10.0kb downstream 10.0kb downstream 12560 true Chr1: 3226995-3239554 Arabidopsis thaliana
AT1G09940 10.0kb downstream 10.0kb downstream 10000 false Chr1: 3226995-3236994 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121511214 5273 Angiosperm View MSA
122373797 5261 Brassicaceae View MSA
123800622 5264 Brassicales-Malvales View MSA
124298016 5266 SBM View MSA
124149764 5268 Malvidae View MSA
123875505 5270 Rosid View MSA
123459315 5271 Pentapetalae View MSA
122494708 5272 Eudicot View MSA
120784272 5274 Embryophyte View MSA
122826200 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.803        
cufflinks 28.496       High
cufflinks 14.385        
cufflinks 21.824        
cufflinks 12.074       Low
cufflinks 30.733     High High

0 Strain