Gene : COBL6 A. thaliana TAIR10
Primary Identifier:  ? AT1G09790 Defline:  (1 of 1) PTHR31673//PTHR31673:SF5 - FAMILY NOT NAMED // COBRA-LIKE PROTEIN 6
Genomic Order:  936 Name:  ? AT1G09790
Secondary Identifier:  ? PAC:19650203
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G09790 0.5kb upstream 0.5kb upstream 2838 true Chr1: 3168482-3171319 Arabidopsis thaliana
AT1G09790 0.5kb upstream 0.5kb upstream 500 false Chr1: 3170820-3171319 Arabidopsis thaliana
AT1G09790 0.5kb downstream 0.5kb downstream 2838 true Chr1: 3167982-3170819 Arabidopsis thaliana
AT1G09790 0.5kb downstream 0.5kb downstream 500 false Chr1: 3167982-3168481 Arabidopsis thaliana
AT1G09790 1.0kb upstream 1.0kb upstream 3338 true Chr1: 3168482-3171819 Arabidopsis thaliana
AT1G09790 1.0kb upstream 1.0kb upstream 1000 false Chr1: 3170820-3171819 Arabidopsis thaliana
AT1G09790 1.0kb downstream 1.0kb downstream 3338 true Chr1: 3167482-3170819 Arabidopsis thaliana
AT1G09790 1.0kb downstream 1.0kb downstream 1000 false Chr1: 3167482-3168481 Arabidopsis thaliana
AT1G09790 2.0kb upstream 2.0kb upstream 4338 true Chr1: 3168482-3172819 Arabidopsis thaliana
AT1G09790 2.0kb upstream 2.0kb upstream 2000 false Chr1: 3170820-3172819 Arabidopsis thaliana
AT1G09790 2.0kb downstream 2.0kb downstream 4338 true Chr1: 3166482-3170819 Arabidopsis thaliana
AT1G09790 2.0kb downstream 2.0kb downstream 2000 false Chr1: 3166482-3168481 Arabidopsis thaliana
AT1G09790 5.0kb upstream 5.0kb upstream 7338 true Chr1: 3168482-3175819 Arabidopsis thaliana
AT1G09790 5.0kb upstream 5.0kb upstream 5000 false Chr1: 3170820-3175819 Arabidopsis thaliana
AT1G09790 5.0kb downstream 5.0kb downstream 7338 true Chr1: 3163482-3170819 Arabidopsis thaliana
AT1G09790 5.0kb downstream 5.0kb downstream 5000 false Chr1: 3163482-3168481 Arabidopsis thaliana
AT1G09790 10.0kb upstream 10.0kb upstream 12338 true Chr1: 3168482-3180819 Arabidopsis thaliana
AT1G09790 10.0kb upstream 10.0kb upstream 10000 false Chr1: 3170820-3180819 Arabidopsis thaliana
AT1G09790 10.0kb downstream 10.0kb downstream 12338 true Chr1: 3158482-3170819 Arabidopsis thaliana
AT1G09790 10.0kb downstream 10.0kb downstream 10000 false Chr1: 3158482-3168481 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026737 5273 Angiosperm View MSA
122370498 5261 Brassicaceae View MSA
123829655 5264 Brassicales-Malvales View MSA
124350360 5266 SBM View MSA
124237738 5268 Malvidae View MSA
124066696 5270 Rosid View MSA
123740872 5271 Pentapetalae View MSA
122795102 5272 Eudicot View MSA
121296516 5274 Embryophyte View MSA
123334664 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.02     Low  

0 Strain