Gene : MYB61 A. thaliana TAIR10
Primary Identifier:  ? AT1G09540 Defline:  (1 of 1) PTHR10641//PTHR10641:SF465 - MYB-LIKE DNA-BINDING PROTEIN MYB // MYB TRANSCRIPTION FACTOR
Genomic Order:  908 Name:  ? AT1G09540
Secondary Identifier:  ? PAC:19656755
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G09540 0.5kb upstream 0.5kb upstream 2254 true Chr1: 3085659-3087912 Arabidopsis thaliana
AT1G09540 0.5kb upstream 0.5kb upstream 500 false Chr1: 3085659-3086158 Arabidopsis thaliana
AT1G09540 0.5kb downstream 0.5kb downstream 2254 true Chr1: 3086159-3088412 Arabidopsis thaliana
AT1G09540 0.5kb downstream 0.5kb downstream 500 false Chr1: 3087913-3088412 Arabidopsis thaliana
AT1G09540 1.0kb upstream 1.0kb upstream 2754 true Chr1: 3085159-3087912 Arabidopsis thaliana
AT1G09540 1.0kb upstream 1.0kb upstream 1000 false Chr1: 3085159-3086158 Arabidopsis thaliana
AT1G09540 1.0kb downstream 1.0kb downstream 2754 true Chr1: 3086159-3088912 Arabidopsis thaliana
AT1G09540 1.0kb downstream 1.0kb downstream 1000 false Chr1: 3087913-3088912 Arabidopsis thaliana
AT1G09540 2.0kb upstream 2.0kb upstream 3754 true Chr1: 3084159-3087912 Arabidopsis thaliana
AT1G09540 2.0kb upstream 2.0kb upstream 2000 false Chr1: 3084159-3086158 Arabidopsis thaliana
AT1G09540 2.0kb downstream 2.0kb downstream 3754 true Chr1: 3086159-3089912 Arabidopsis thaliana
AT1G09540 2.0kb downstream 2.0kb downstream 2000 false Chr1: 3087913-3089912 Arabidopsis thaliana
AT1G09540 5.0kb upstream 5.0kb upstream 6754 true Chr1: 3081159-3087912 Arabidopsis thaliana
AT1G09540 5.0kb upstream 5.0kb upstream 5000 false Chr1: 3081159-3086158 Arabidopsis thaliana
AT1G09540 5.0kb downstream 5.0kb downstream 6754 true Chr1: 3086159-3092912 Arabidopsis thaliana
AT1G09540 5.0kb downstream 5.0kb downstream 5000 false Chr1: 3087913-3092912 Arabidopsis thaliana
AT1G09540 10.0kb upstream 10.0kb upstream 11754 true Chr1: 3076159-3087912 Arabidopsis thaliana
AT1G09540 10.0kb upstream 10.0kb upstream 10000 false Chr1: 3076159-3086158 Arabidopsis thaliana
AT1G09540 10.0kb downstream 10.0kb downstream 11754 true Chr1: 3086159-3097912 Arabidopsis thaliana
AT1G09540 10.0kb downstream 10.0kb downstream 10000 false Chr1: 3087913-3097912 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361512 5261 Brassicaceae View MSA
123840372 5264 Brassicales-Malvales View MSA
124348211 5266 SBM View MSA
124251841 5268 Malvidae View MSA
124070953 5270 Rosid View MSA
123745100 5271 Pentapetalae View MSA
122796774 5272 Eudicot View MSA
122046378 5273 Angiosperm View MSA
121349090 5274 Embryophyte View MSA
123381162 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.191     Low  
cufflinks 1.15        
cufflinks 0.1     Low Low
cufflinks 1.556       High
cufflinks 0.086     Low Low
cufflinks 1.275        

0 Strain