Gene : AT1G09660 A. thaliana TAIR10
Defline:  (1 of 1) PTHR11208//PTHR11208:SF48 - RNA-BINDING PROTEIN RELATED // SUBFAMILY NOT NAMED Genomic Order:  923
Name:  ? AT1G09660 Secondary Identifier:  ? PAC:19649370
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G09660 0.5kb upstream 0.5kb upstream 3824 true Chr1: 3127771-3131594 Arabidopsis thaliana
AT1G09660 0.5kb upstream 0.5kb upstream 500 false Chr1: 3131095-3131594 Arabidopsis thaliana
AT1G09660 0.5kb downstream 0.5kb downstream 3824 true Chr1: 3127271-3131094 Arabidopsis thaliana
AT1G09660 0.5kb downstream 0.5kb downstream 500 false Chr1: 3127271-3127770 Arabidopsis thaliana
AT1G09660 1.0kb upstream 1.0kb upstream 4324 true Chr1: 3127771-3132094 Arabidopsis thaliana
AT1G09660 1.0kb upstream 1.0kb upstream 1000 false Chr1: 3131095-3132094 Arabidopsis thaliana
AT1G09660 1.0kb downstream 1.0kb downstream 4324 true Chr1: 3126771-3131094 Arabidopsis thaliana
AT1G09660 1.0kb downstream 1.0kb downstream 1000 false Chr1: 3126771-3127770 Arabidopsis thaliana
AT1G09660 2.0kb upstream 2.0kb upstream 5324 true Chr1: 3127771-3133094 Arabidopsis thaliana
AT1G09660 2.0kb upstream 2.0kb upstream 2000 false Chr1: 3131095-3133094 Arabidopsis thaliana
AT1G09660 2.0kb downstream 2.0kb downstream 5324 true Chr1: 3125771-3131094 Arabidopsis thaliana
AT1G09660 2.0kb downstream 2.0kb downstream 2000 false Chr1: 3125771-3127770 Arabidopsis thaliana
AT1G09660 5.0kb upstream 5.0kb upstream 8324 true Chr1: 3127771-3136094 Arabidopsis thaliana
AT1G09660 5.0kb upstream 5.0kb upstream 5000 false Chr1: 3131095-3136094 Arabidopsis thaliana
AT1G09660 5.0kb downstream 5.0kb downstream 8324 true Chr1: 3122771-3131094 Arabidopsis thaliana
AT1G09660 5.0kb downstream 5.0kb downstream 5000 false Chr1: 3122771-3127770 Arabidopsis thaliana
AT1G09660 10.0kb upstream 10.0kb upstream 13324 true Chr1: 3127771-3141094 Arabidopsis thaliana
AT1G09660 10.0kb upstream 10.0kb upstream 10000 false Chr1: 3131095-3141094 Arabidopsis thaliana
AT1G09660 10.0kb downstream 10.0kb downstream 13324 true Chr1: 3117771-3131094 Arabidopsis thaliana
AT1G09660 10.0kb downstream 10.0kb downstream 10000 false Chr1: 3117771-3127770 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361883 5261 Brassicaceae View MSA
123829053 5264 Brassicales-Malvales View MSA
124342096 5266 SBM View MSA
124247518 5268 Malvidae View MSA
124064497 5270 Rosid View MSA
123743356 5271 Pentapetalae View MSA
122788598 5272 Eudicot View MSA
122041974 5273 Angiosperm View MSA
121350686 5274 Embryophyte View MSA
123426021 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.351        
cufflinks 6.413        
cufflinks 4.281        
cufflinks 5.972        
cufflinks 3.767       Low
cufflinks 6.572       High

0 Strain