Gene : AT1G09480 A. thaliana TAIR10
Defline:  (1 of 6) PTHR10366:SF362 - ALCOHOL DEHYDROGENASE-RELATED Genomic Order:  901
Name:  ? AT1G09480 Secondary Identifier:  ? PAC:19653656
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-361 Arabidopsis thaliana pathologic  

Genomics

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Gene Structure Displayer

Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G09480 0.5kb upstream 0.5kb upstream 3187 true Chr1: 3057475-3060661 Arabidopsis thaliana
AT1G09480 0.5kb upstream 0.5kb upstream 500 false Chr1: 3057475-3057974 Arabidopsis thaliana
AT1G09480 0.5kb downstream 0.5kb downstream 3187 true Chr1: 3057975-3061161 Arabidopsis thaliana
AT1G09480 0.5kb downstream 0.5kb downstream 500 false Chr1: 3060662-3061161 Arabidopsis thaliana
AT1G09480 1.0kb upstream 1.0kb upstream 3687 true Chr1: 3056975-3060661 Arabidopsis thaliana
AT1G09480 1.0kb upstream 1.0kb upstream 1000 false Chr1: 3056975-3057974 Arabidopsis thaliana
AT1G09480 1.0kb downstream 1.0kb downstream 3687 true Chr1: 3057975-3061661 Arabidopsis thaliana
AT1G09480 1.0kb downstream 1.0kb downstream 1000 false Chr1: 3060662-3061661 Arabidopsis thaliana
AT1G09480 2.0kb upstream 2.0kb upstream 4687 true Chr1: 3055975-3060661 Arabidopsis thaliana
AT1G09480 2.0kb upstream 2.0kb upstream 2000 false Chr1: 3055975-3057974 Arabidopsis thaliana
AT1G09480 2.0kb downstream 2.0kb downstream 4687 true Chr1: 3057975-3062661 Arabidopsis thaliana
AT1G09480 2.0kb downstream 2.0kb downstream 2000 false Chr1: 3060662-3062661 Arabidopsis thaliana
AT1G09480 5.0kb upstream 5.0kb upstream 7687 true Chr1: 3052975-3060661 Arabidopsis thaliana
AT1G09480 5.0kb upstream 5.0kb upstream 5000 false Chr1: 3052975-3057974 Arabidopsis thaliana
AT1G09480 5.0kb downstream 5.0kb downstream 7687 true Chr1: 3057975-3065661 Arabidopsis thaliana
AT1G09480 5.0kb downstream 5.0kb downstream 5000 false Chr1: 3060662-3065661 Arabidopsis thaliana
AT1G09480 10.0kb upstream 10.0kb upstream 12687 true Chr1: 3047975-3060661 Arabidopsis thaliana
AT1G09480 10.0kb upstream 10.0kb upstream 10000 false Chr1: 3047975-3057974 Arabidopsis thaliana
AT1G09480 10.0kb downstream 10.0kb downstream 12687 true Chr1: 3057975-3070661 Arabidopsis thaliana
AT1G09480 10.0kb downstream 10.0kb downstream 10000 false Chr1: 3060662-3070661 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121510262 5273 Angiosperm View MSA
122361344 5261 Brassicaceae View MSA
123798141 5264 Brassicales-Malvales View MSA
124295816 5266 SBM View MSA
124148149 5268 Malvidae View MSA
123874205 5270 Rosid View MSA
123458212 5271 Pentapetalae View MSA
122493621 5272 Eudicot View MSA
120783368 5274 Embryophyte View MSA
123428289 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.178        
cufflinks 1.28        
cufflinks 0.578       Low
cufflinks 1.212        
cufflinks 1.233        
cufflinks 1.304        

0 Strain