Gene : AT1G09490 A. thaliana TAIR10
Defline:  (1 of 6) PTHR10366:SF362 - ALCOHOL DEHYDROGENASE-RELATED Genomic Order:  903
Name:  ? AT1G09490 Secondary Identifier:  ? PAC:19656894
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-361 Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G09490 0.5kb upstream 0.5kb upstream 2314 true Chr1: 3063624-3065937 Arabidopsis thaliana
AT1G09490 0.5kb upstream 0.5kb upstream 500 false Chr1: 3063624-3064123 Arabidopsis thaliana
AT1G09490 0.5kb downstream 0.5kb downstream 2314 true Chr1: 3064124-3066437 Arabidopsis thaliana
AT1G09490 0.5kb downstream 0.5kb downstream 500 false Chr1: 3065938-3066437 Arabidopsis thaliana
AT1G09490 1.0kb upstream 1.0kb upstream 2814 true Chr1: 3063124-3065937 Arabidopsis thaliana
AT1G09490 1.0kb upstream 1.0kb upstream 1000 false Chr1: 3063124-3064123 Arabidopsis thaliana
AT1G09490 1.0kb downstream 1.0kb downstream 2814 true Chr1: 3064124-3066937 Arabidopsis thaliana
AT1G09490 1.0kb downstream 1.0kb downstream 1000 false Chr1: 3065938-3066937 Arabidopsis thaliana
AT1G09490 2.0kb upstream 2.0kb upstream 3814 true Chr1: 3062124-3065937 Arabidopsis thaliana
AT1G09490 2.0kb upstream 2.0kb upstream 2000 false Chr1: 3062124-3064123 Arabidopsis thaliana
AT1G09490 2.0kb downstream 2.0kb downstream 3814 true Chr1: 3064124-3067937 Arabidopsis thaliana
AT1G09490 2.0kb downstream 2.0kb downstream 2000 false Chr1: 3065938-3067937 Arabidopsis thaliana
AT1G09490 5.0kb upstream 5.0kb upstream 6814 true Chr1: 3059124-3065937 Arabidopsis thaliana
AT1G09490 5.0kb upstream 5.0kb upstream 5000 false Chr1: 3059124-3064123 Arabidopsis thaliana
AT1G09490 5.0kb downstream 5.0kb downstream 6814 true Chr1: 3064124-3070937 Arabidopsis thaliana
AT1G09490 5.0kb downstream 5.0kb downstream 5000 false Chr1: 3065938-3070937 Arabidopsis thaliana
AT1G09490 10.0kb upstream 10.0kb upstream 11814 true Chr1: 3054124-3065937 Arabidopsis thaliana
AT1G09490 10.0kb upstream 10.0kb upstream 10000 false Chr1: 3054124-3064123 Arabidopsis thaliana
AT1G09490 10.0kb downstream 10.0kb downstream 11814 true Chr1: 3064124-3075937 Arabidopsis thaliana
AT1G09490 10.0kb downstream 10.0kb downstream 10000 false Chr1: 3065938-3075937 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121510262 5273 Angiosperm View MSA
122361344 5261 Brassicaceae View MSA
123798141 5264 Brassicales-Malvales View MSA
124295816 5266 SBM View MSA
124148149 5268 Malvidae View MSA
123874205 5270 Rosid View MSA
123458212 5271 Pentapetalae View MSA
122493621 5272 Eudicot View MSA
120783368 5274 Embryophyte View MSA
123428289 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.392       High
cufflinks 6.666        
cufflinks 8.544        
cufflinks 6.404       Low
cufflinks 11.079       High
cufflinks 6.992        

0 Strain