Gene : CAX11 A. thaliana TAIR10
Primary Identifier:  ? AT1G08960 Defline:  (1 of 3) K13754 - solute carrier family 24 (sodium/potassium/calcium exchanger), member 6 (SLC24A6, NCKX6)
Genomic Order:  843 Name:  ? AT1G08960
Secondary Identifier:  ? PAC:19656275
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G08960 0.5kb upstream 0.5kb upstream 3090 true Chr1: 2879142-2882231 Arabidopsis thaliana
AT1G08960 0.5kb upstream 0.5kb upstream 500 false Chr1: 2879142-2879641 Arabidopsis thaliana
AT1G08960 0.5kb downstream 0.5kb downstream 3090 true Chr1: 2879642-2882731 Arabidopsis thaliana
AT1G08960 0.5kb downstream 0.5kb downstream 500 false Chr1: 2882232-2882731 Arabidopsis thaliana
AT1G08960 1.0kb upstream 1.0kb upstream 3590 true Chr1: 2878642-2882231 Arabidopsis thaliana
AT1G08960 1.0kb upstream 1.0kb upstream 1000 false Chr1: 2878642-2879641 Arabidopsis thaliana
AT1G08960 1.0kb downstream 1.0kb downstream 3590 true Chr1: 2879642-2883231 Arabidopsis thaliana
AT1G08960 1.0kb downstream 1.0kb downstream 1000 false Chr1: 2882232-2883231 Arabidopsis thaliana
AT1G08960 2.0kb upstream 2.0kb upstream 4590 true Chr1: 2877642-2882231 Arabidopsis thaliana
AT1G08960 2.0kb upstream 2.0kb upstream 2000 false Chr1: 2877642-2879641 Arabidopsis thaliana
AT1G08960 2.0kb downstream 2.0kb downstream 4590 true Chr1: 2879642-2884231 Arabidopsis thaliana
AT1G08960 2.0kb downstream 2.0kb downstream 2000 false Chr1: 2882232-2884231 Arabidopsis thaliana
AT1G08960 5.0kb upstream 5.0kb upstream 7590 true Chr1: 2874642-2882231 Arabidopsis thaliana
AT1G08960 5.0kb upstream 5.0kb upstream 5000 false Chr1: 2874642-2879641 Arabidopsis thaliana
AT1G08960 5.0kb downstream 5.0kb downstream 7590 true Chr1: 2879642-2887231 Arabidopsis thaliana
AT1G08960 5.0kb downstream 5.0kb downstream 5000 false Chr1: 2882232-2887231 Arabidopsis thaliana
AT1G08960 10.0kb upstream 10.0kb upstream 12590 true Chr1: 2869642-2882231 Arabidopsis thaliana
AT1G08960 10.0kb upstream 10.0kb upstream 10000 false Chr1: 2869642-2879641 Arabidopsis thaliana
AT1G08960 10.0kb downstream 10.0kb downstream 12590 true Chr1: 2879642-2892231 Arabidopsis thaliana
AT1G08960 10.0kb downstream 10.0kb downstream 10000 false Chr1: 2882232-2892231 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026242 5273 Angiosperm View MSA
122374973 5261 Brassicaceae View MSA
123828118 5264 Brassicales-Malvales View MSA
124343265 5266 SBM View MSA
124253372 5268 Malvidae View MSA
124062554 5270 Rosid View MSA
123738226 5271 Pentapetalae View MSA
122791182 5272 Eudicot View MSA
121350088 5274 Embryophyte View MSA
123427764 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.659        
cufflinks 5.499        
cufflinks 3.654        
cufflinks 6.052        
cufflinks 3.425        
cufflinks 7.89       High

0 Strain