Gene : SRC2 A. thaliana TAIR10
Primary Identifier:  ? AT1G09070 Defline:  (1 of 5) PTHR32246//PTHR32246:SF18 - FAMILY NOT NAMED // C2 DOMAIN-CONTAINING PROTEIN-RELATED
Genomic Order:  856 Name:  ? AT1G09070
Secondary Identifier:  ? PAC:19652247
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G09070 0.5kb upstream 0.5kb upstream 1766 true Chr1: 2927203-2928968 Arabidopsis thaliana
AT1G09070 0.5kb upstream 0.5kb upstream 500 false Chr1: 2927203-2927702 Arabidopsis thaliana
AT1G09070 0.5kb downstream 0.5kb downstream 1766 true Chr1: 2927703-2929468 Arabidopsis thaliana
AT1G09070 0.5kb downstream 0.5kb downstream 500 false Chr1: 2928969-2929468 Arabidopsis thaliana
AT1G09070 1.0kb upstream 1.0kb upstream 2266 true Chr1: 2926703-2928968 Arabidopsis thaliana
AT1G09070 1.0kb upstream 1.0kb upstream 1000 false Chr1: 2926703-2927702 Arabidopsis thaliana
AT1G09070 1.0kb downstream 1.0kb downstream 2266 true Chr1: 2927703-2929968 Arabidopsis thaliana
AT1G09070 1.0kb downstream 1.0kb downstream 1000 false Chr1: 2928969-2929968 Arabidopsis thaliana
AT1G09070 2.0kb upstream 2.0kb upstream 3266 true Chr1: 2925703-2928968 Arabidopsis thaliana
AT1G09070 2.0kb upstream 2.0kb upstream 2000 false Chr1: 2925703-2927702 Arabidopsis thaliana
AT1G09070 2.0kb downstream 2.0kb downstream 3266 true Chr1: 2927703-2930968 Arabidopsis thaliana
AT1G09070 2.0kb downstream 2.0kb downstream 2000 false Chr1: 2928969-2930968 Arabidopsis thaliana
AT1G09070 5.0kb upstream 5.0kb upstream 6266 true Chr1: 2922703-2928968 Arabidopsis thaliana
AT1G09070 5.0kb upstream 5.0kb upstream 5000 false Chr1: 2922703-2927702 Arabidopsis thaliana
AT1G09070 5.0kb downstream 5.0kb downstream 6266 true Chr1: 2927703-2933968 Arabidopsis thaliana
AT1G09070 5.0kb downstream 5.0kb downstream 5000 false Chr1: 2928969-2933968 Arabidopsis thaliana
AT1G09070 10.0kb upstream 10.0kb upstream 11266 true Chr1: 2917703-2928968 Arabidopsis thaliana
AT1G09070 10.0kb upstream 10.0kb upstream 10000 false Chr1: 2917703-2927702 Arabidopsis thaliana
AT1G09070 10.0kb downstream 10.0kb downstream 11266 true Chr1: 2927703-2938968 Arabidopsis thaliana
AT1G09070 10.0kb downstream 10.0kb downstream 10000 false Chr1: 2928969-2938968 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372465 5261 Brassicaceae View MSA
123838085 5264 Brassicales-Malvales View MSA
124346097 5266 SBM View MSA
124251084 5268 Malvidae View MSA
124072959 5270 Rosid View MSA
123744128 5271 Pentapetalae View MSA
122794522 5272 Eudicot View MSA
122050053 5273 Angiosperm View MSA
121351739 5274 Embryophyte View MSA
123427392 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 134.065     High Low
cufflinks 557.167     High  
cufflinks 198.596     High  
cufflinks 457.631     High  
cufflinks 132.167     High Low
cufflinks 612.568     High High

0 Strain