Gene : AIP3 A. thaliana TAIR10
Primary Identifier:  ? AT1G08780 Defline:  (1 of 1) K09550 - prefoldin subunit 4 (PFDN4)
Genomic Order:  827 Name:  ? AT1G08780
Secondary Identifier:  ? PAC:19653220
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G08780 0.5kb upstream 0.5kb upstream 1914 true Chr1: 2809778-2811691 Arabidopsis thaliana
AT1G08780 0.5kb upstream 0.5kb upstream 500 false Chr1: 2811192-2811691 Arabidopsis thaliana
AT1G08780 0.5kb downstream 0.5kb downstream 1914 true Chr1: 2809278-2811191 Arabidopsis thaliana
AT1G08780 0.5kb downstream 0.5kb downstream 500 false Chr1: 2809278-2809777 Arabidopsis thaliana
AT1G08780 1.0kb upstream 1.0kb upstream 2414 true Chr1: 2809778-2812191 Arabidopsis thaliana
AT1G08780 1.0kb upstream 1.0kb upstream 1000 false Chr1: 2811192-2812191 Arabidopsis thaliana
AT1G08780 1.0kb downstream 1.0kb downstream 2414 true Chr1: 2808778-2811191 Arabidopsis thaliana
AT1G08780 1.0kb downstream 1.0kb downstream 1000 false Chr1: 2808778-2809777 Arabidopsis thaliana
AT1G08780 2.0kb upstream 2.0kb upstream 3414 true Chr1: 2809778-2813191 Arabidopsis thaliana
AT1G08780 2.0kb upstream 2.0kb upstream 2000 false Chr1: 2811192-2813191 Arabidopsis thaliana
AT1G08780 2.0kb downstream 2.0kb downstream 3414 true Chr1: 2807778-2811191 Arabidopsis thaliana
AT1G08780 2.0kb downstream 2.0kb downstream 2000 false Chr1: 2807778-2809777 Arabidopsis thaliana
AT1G08780 5.0kb upstream 5.0kb upstream 6414 true Chr1: 2809778-2816191 Arabidopsis thaliana
AT1G08780 5.0kb upstream 5.0kb upstream 5000 false Chr1: 2811192-2816191 Arabidopsis thaliana
AT1G08780 5.0kb downstream 5.0kb downstream 6414 true Chr1: 2804778-2811191 Arabidopsis thaliana
AT1G08780 5.0kb downstream 5.0kb downstream 5000 false Chr1: 2804778-2809777 Arabidopsis thaliana
AT1G08780 10.0kb upstream 10.0kb upstream 11414 true Chr1: 2809778-2821191 Arabidopsis thaliana
AT1G08780 10.0kb upstream 10.0kb upstream 10000 false Chr1: 2811192-2821191 Arabidopsis thaliana
AT1G08780 10.0kb downstream 10.0kb downstream 11414 true Chr1: 2799778-2811191 Arabidopsis thaliana
AT1G08780 10.0kb downstream 10.0kb downstream 10000 false Chr1: 2799778-2809777 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371188 5261 Brassicaceae View MSA
123839539 5264 Brassicales-Malvales View MSA
124337520 5266 SBM View MSA
124244969 5268 Malvidae View MSA
124063538 5270 Rosid View MSA
123738844 5271 Pentapetalae View MSA
122790794 5272 Eudicot View MSA
122043024 5273 Angiosperm View MSA
121347563 5274 Embryophyte View MSA
123426081 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.959        
cufflinks 17.307        
cufflinks 9.285        
cufflinks 17.961        
cufflinks 8.554       Low
cufflinks 18.189        

0 Strain