Gene : TRFL3 A. thaliana TAIR10
Primary Identifier:  ? AT1G17460 Defline:  (1 of 2) PTHR21717:SF25 - MYB FAMILY TRANSCRIPTION FACTOR TRFL6-RELATED
Genomic Order:  1759 Name:  ? AT1G17460
Secondary Identifier:  ? PAC:19651724
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G17460 0.5kb upstream 0.5kb upstream 4403 true Chr1: 5998314-6002716 Arabidopsis thaliana
AT1G17460 0.5kb upstream 0.5kb upstream 500 false Chr1: 5998314-5998813 Arabidopsis thaliana
AT1G17460 0.5kb downstream 0.5kb downstream 4403 true Chr1: 5998814-6003216 Arabidopsis thaliana
AT1G17460 0.5kb downstream 0.5kb downstream 500 false Chr1: 6002717-6003216 Arabidopsis thaliana
AT1G17460 1.0kb upstream 1.0kb upstream 4903 true Chr1: 5997814-6002716 Arabidopsis thaliana
AT1G17460 1.0kb upstream 1.0kb upstream 1000 false Chr1: 5997814-5998813 Arabidopsis thaliana
AT1G17460 1.0kb downstream 1.0kb downstream 4903 true Chr1: 5998814-6003716 Arabidopsis thaliana
AT1G17460 1.0kb downstream 1.0kb downstream 1000 false Chr1: 6002717-6003716 Arabidopsis thaliana
AT1G17460 2.0kb upstream 2.0kb upstream 5903 true Chr1: 5996814-6002716 Arabidopsis thaliana
AT1G17460 2.0kb upstream 2.0kb upstream 2000 false Chr1: 5996814-5998813 Arabidopsis thaliana
AT1G17460 2.0kb downstream 2.0kb downstream 5903 true Chr1: 5998814-6004716 Arabidopsis thaliana
AT1G17460 2.0kb downstream 2.0kb downstream 2000 false Chr1: 6002717-6004716 Arabidopsis thaliana
AT1G17460 5.0kb upstream 5.0kb upstream 8903 true Chr1: 5993814-6002716 Arabidopsis thaliana
AT1G17460 5.0kb upstream 5.0kb upstream 5000 false Chr1: 5993814-5998813 Arabidopsis thaliana
AT1G17460 5.0kb downstream 5.0kb downstream 8903 true Chr1: 5998814-6007716 Arabidopsis thaliana
AT1G17460 5.0kb downstream 5.0kb downstream 5000 false Chr1: 6002717-6007716 Arabidopsis thaliana
AT1G17460 10.0kb upstream 10.0kb upstream 13903 true Chr1: 5988814-6002716 Arabidopsis thaliana
AT1G17460 10.0kb upstream 10.0kb upstream 10000 false Chr1: 5988814-5998813 Arabidopsis thaliana
AT1G17460 10.0kb downstream 10.0kb downstream 13903 true Chr1: 5998814-6012716 Arabidopsis thaliana
AT1G17460 10.0kb downstream 10.0kb downstream 10000 false Chr1: 6002717-6012716 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367374 5261 Brassicaceae View MSA
123841384 5264 Brassicales-Malvales View MSA
124346617 5266 SBM View MSA
124252026 5268 Malvidae View MSA
124061716 5270 Rosid View MSA
123747162 5271 Pentapetalae View MSA
122792164 5272 Eudicot View MSA
122046145 5273 Angiosperm View MSA
123429070 5275 Viridiplantae View MSA
121348022 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.552        
cufflinks 1.53        
cufflinks 0.515       Low
cufflinks 1.97        
cufflinks 0.516       Low
cufflinks 1.692        

0 Strain