Gene : HLL A. thaliana TAIR10
Primary Identifier:  ? AT1G17560 Defline:  (1 of 3) K02874 - large subunit ribosomal protein L14 (RP-L14, MRPL14, rplN)
Genomic Order:  1770 Name:  ? AT1G17560
Secondary Identifier:  ? PAC:19651757
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0 Pathways

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G17560 0.5kb upstream 0.5kb upstream 1729 true Chr1: 6037464-6039192 Arabidopsis thaliana
AT1G17560 0.5kb upstream 0.5kb upstream 500 false Chr1: 6038693-6039192 Arabidopsis thaliana
AT1G17560 0.5kb downstream 0.5kb downstream 1729 true Chr1: 6036964-6038692 Arabidopsis thaliana
AT1G17560 0.5kb downstream 0.5kb downstream 500 false Chr1: 6036964-6037463 Arabidopsis thaliana
AT1G17560 1.0kb upstream 1.0kb upstream 2229 true Chr1: 6037464-6039692 Arabidopsis thaliana
AT1G17560 1.0kb upstream 1.0kb upstream 1000 false Chr1: 6038693-6039692 Arabidopsis thaliana
AT1G17560 1.0kb downstream 1.0kb downstream 2229 true Chr1: 6036464-6038692 Arabidopsis thaliana
AT1G17560 1.0kb downstream 1.0kb downstream 1000 false Chr1: 6036464-6037463 Arabidopsis thaliana
AT1G17560 2.0kb upstream 2.0kb upstream 3229 true Chr1: 6037464-6040692 Arabidopsis thaliana
AT1G17560 2.0kb upstream 2.0kb upstream 2000 false Chr1: 6038693-6040692 Arabidopsis thaliana
AT1G17560 2.0kb downstream 2.0kb downstream 3229 true Chr1: 6035464-6038692 Arabidopsis thaliana
AT1G17560 2.0kb downstream 2.0kb downstream 2000 false Chr1: 6035464-6037463 Arabidopsis thaliana
AT1G17560 5.0kb upstream 5.0kb upstream 6229 true Chr1: 6037464-6043692 Arabidopsis thaliana
AT1G17560 5.0kb upstream 5.0kb upstream 5000 false Chr1: 6038693-6043692 Arabidopsis thaliana
AT1G17560 5.0kb downstream 5.0kb downstream 6229 true Chr1: 6032464-6038692 Arabidopsis thaliana
AT1G17560 5.0kb downstream 5.0kb downstream 5000 false Chr1: 6032464-6037463 Arabidopsis thaliana
AT1G17560 10.0kb upstream 10.0kb upstream 11229 true Chr1: 6037464-6048692 Arabidopsis thaliana
AT1G17560 10.0kb upstream 10.0kb upstream 10000 false Chr1: 6038693-6048692 Arabidopsis thaliana
AT1G17560 10.0kb downstream 10.0kb downstream 11229 true Chr1: 6027464-6038692 Arabidopsis thaliana
AT1G17560 10.0kb downstream 10.0kb downstream 10000 false Chr1: 6027464-6037463 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381248 5261 Brassicaceae View MSA
123838727 5264 Brassicales-Malvales View MSA
124338607 5266 SBM View MSA
124250290 5268 Malvidae View MSA
124074043 5270 Rosid View MSA
123752507 5271 Pentapetalae View MSA
122797702 5272 Eudicot View MSA
122046232 5273 Angiosperm View MSA
121351618 5274 Embryophyte View MSA
123423996 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.626        
cufflinks 8.491        
cufflinks 3.37        
cufflinks 6.913        
cufflinks 2.738       Low
cufflinks 9.778       High

0 Strain