Gene : AT1G17430 A. thaliana TAIR10
Defline:  (1 of 2) 3.7.1.14 - 2-hydroxy-6-oxonona-2,4-dienedioate hydrolase Genomic Order:  1755
Name:  ? AT1G17430 Secondary Identifier:  ? PAC:19652546
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G17430 0.5kb upstream 0.5kb upstream 2247 true Chr1: 5981767-5984013 Arabidopsis thaliana
AT1G17430 0.5kb upstream 0.5kb upstream 500 false Chr1: 5981767-5982266 Arabidopsis thaliana
AT1G17430 0.5kb downstream 0.5kb downstream 2247 true Chr1: 5982267-5984513 Arabidopsis thaliana
AT1G17430 0.5kb downstream 0.5kb downstream 500 false Chr1: 5984014-5984513 Arabidopsis thaliana
AT1G17430 1.0kb upstream 1.0kb upstream 2747 true Chr1: 5981267-5984013 Arabidopsis thaliana
AT1G17430 1.0kb upstream 1.0kb upstream 1000 false Chr1: 5981267-5982266 Arabidopsis thaliana
AT1G17430 1.0kb downstream 1.0kb downstream 2747 true Chr1: 5982267-5985013 Arabidopsis thaliana
AT1G17430 1.0kb downstream 1.0kb downstream 1000 false Chr1: 5984014-5985013 Arabidopsis thaliana
AT1G17430 2.0kb upstream 2.0kb upstream 3747 true Chr1: 5980267-5984013 Arabidopsis thaliana
AT1G17430 2.0kb upstream 2.0kb upstream 2000 false Chr1: 5980267-5982266 Arabidopsis thaliana
AT1G17430 2.0kb downstream 2.0kb downstream 3747 true Chr1: 5982267-5986013 Arabidopsis thaliana
AT1G17430 2.0kb downstream 2.0kb downstream 2000 false Chr1: 5984014-5986013 Arabidopsis thaliana
AT1G17430 5.0kb upstream 5.0kb upstream 6747 true Chr1: 5977267-5984013 Arabidopsis thaliana
AT1G17430 5.0kb upstream 5.0kb upstream 5000 false Chr1: 5977267-5982266 Arabidopsis thaliana
AT1G17430 5.0kb downstream 5.0kb downstream 6747 true Chr1: 5982267-5989013 Arabidopsis thaliana
AT1G17430 5.0kb downstream 5.0kb downstream 5000 false Chr1: 5984014-5989013 Arabidopsis thaliana
AT1G17430 10.0kb upstream 10.0kb upstream 11747 true Chr1: 5972267-5984013 Arabidopsis thaliana
AT1G17430 10.0kb upstream 10.0kb upstream 10000 false Chr1: 5972267-5982266 Arabidopsis thaliana
AT1G17430 10.0kb downstream 10.0kb downstream 11747 true Chr1: 5982267-5994013 Arabidopsis thaliana
AT1G17430 10.0kb downstream 10.0kb downstream 10000 false Chr1: 5984014-5994013 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026796 5273 Angiosperm View MSA
122373910 5261 Brassicaceae View MSA
123837181 5264 Brassicales-Malvales View MSA
124344749 5266 SBM View MSA
124244289 5268 Malvidae View MSA
124064864 5270 Rosid View MSA
123739355 5271 Pentapetalae View MSA
122769951 5272 Eudicot View MSA
123428977 5275 Viridiplantae View MSA
121351643 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.086        
cufflinks 26.05       High
cufflinks 12.188       Low
cufflinks 23.71        
cufflinks 13.496       Low
cufflinks 21.738        

0 Strain