Gene : FUG1 A. thaliana TAIR10
Primary Identifier:  ? AT1G17220 Defline:  (1 of 1) PTHR23115//PTHR23115:SF138 - TRANSLATION FACTOR // TRANSLATION INITIATION FACTOR IF-2, CHLOROPLASTIC
Genomic Order:  1733 Name:  ? AT1G17220
Secondary Identifier:  ? PAC:19656314
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G17220 0.5kb upstream 0.5kb upstream 5888 true Chr1: 5884583-5890470 Arabidopsis thaliana
AT1G17220 0.5kb upstream 0.5kb upstream 500 false Chr1: 5884583-5885082 Arabidopsis thaliana
AT1G17220 0.5kb downstream 0.5kb downstream 5888 true Chr1: 5885083-5890970 Arabidopsis thaliana
AT1G17220 0.5kb downstream 0.5kb downstream 500 false Chr1: 5890471-5890970 Arabidopsis thaliana
AT1G17220 1.0kb upstream 1.0kb upstream 6388 true Chr1: 5884083-5890470 Arabidopsis thaliana
AT1G17220 1.0kb upstream 1.0kb upstream 1000 false Chr1: 5884083-5885082 Arabidopsis thaliana
AT1G17220 1.0kb downstream 1.0kb downstream 6388 true Chr1: 5885083-5891470 Arabidopsis thaliana
AT1G17220 1.0kb downstream 1.0kb downstream 1000 false Chr1: 5890471-5891470 Arabidopsis thaliana
AT1G17220 2.0kb upstream 2.0kb upstream 7388 true Chr1: 5883083-5890470 Arabidopsis thaliana
AT1G17220 2.0kb upstream 2.0kb upstream 2000 false Chr1: 5883083-5885082 Arabidopsis thaliana
AT1G17220 2.0kb downstream 2.0kb downstream 7388 true Chr1: 5885083-5892470 Arabidopsis thaliana
AT1G17220 2.0kb downstream 2.0kb downstream 2000 false Chr1: 5890471-5892470 Arabidopsis thaliana
AT1G17220 5.0kb upstream 5.0kb upstream 10388 true Chr1: 5880083-5890470 Arabidopsis thaliana
AT1G17220 5.0kb upstream 5.0kb upstream 5000 false Chr1: 5880083-5885082 Arabidopsis thaliana
AT1G17220 5.0kb downstream 5.0kb downstream 10388 true Chr1: 5885083-5895470 Arabidopsis thaliana
AT1G17220 5.0kb downstream 5.0kb downstream 5000 false Chr1: 5890471-5895470 Arabidopsis thaliana
AT1G17220 10.0kb upstream 10.0kb upstream 15388 true Chr1: 5875083-5890470 Arabidopsis thaliana
AT1G17220 10.0kb upstream 10.0kb upstream 10000 false Chr1: 5875083-5885082 Arabidopsis thaliana
AT1G17220 10.0kb downstream 10.0kb downstream 15388 true Chr1: 5885083-5900470 Arabidopsis thaliana
AT1G17220 10.0kb downstream 10.0kb downstream 10000 false Chr1: 5890471-5900470 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377103 5261 Brassicaceae View MSA
123831023 5264 Brassicales-Malvales View MSA
124340073 5266 SBM View MSA
124241105 5268 Malvidae View MSA
124065303 5270 Rosid View MSA
123736618 5271 Pentapetalae View MSA
122788902 5272 Eudicot View MSA
122051139 5273 Angiosperm View MSA
121347361 5274 Embryophyte View MSA
123428388 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 89.724     High  
cufflinks 3.643        
cufflinks 93.211     High  
cufflinks 3.998        
cufflinks 76.407     High  
cufflinks 2.779       Low

0 Strain