Gene : AT1G17330 A. thaliana TAIR10
Defline:  (1 of 1) K06950 - uncharacterized protein (K06950) Genomic Order:  1745
Name:  ? AT1G17330 Secondary Identifier:  ? PAC:19652973
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G17330 0.5kb upstream 0.5kb upstream 2423 true Chr1: 5929409-5931831 Arabidopsis thaliana
AT1G17330 0.5kb upstream 0.5kb upstream 500 false Chr1: 5929409-5929908 Arabidopsis thaliana
AT1G17330 0.5kb downstream 0.5kb downstream 2423 true Chr1: 5929909-5932331 Arabidopsis thaliana
AT1G17330 0.5kb downstream 0.5kb downstream 500 false Chr1: 5931832-5932331 Arabidopsis thaliana
AT1G17330 1.0kb upstream 1.0kb upstream 2923 true Chr1: 5928909-5931831 Arabidopsis thaliana
AT1G17330 1.0kb upstream 1.0kb upstream 1000 false Chr1: 5928909-5929908 Arabidopsis thaliana
AT1G17330 1.0kb downstream 1.0kb downstream 2923 true Chr1: 5929909-5932831 Arabidopsis thaliana
AT1G17330 1.0kb downstream 1.0kb downstream 1000 false Chr1: 5931832-5932831 Arabidopsis thaliana
AT1G17330 2.0kb upstream 2.0kb upstream 3923 true Chr1: 5927909-5931831 Arabidopsis thaliana
AT1G17330 2.0kb upstream 2.0kb upstream 2000 false Chr1: 5927909-5929908 Arabidopsis thaliana
AT1G17330 2.0kb downstream 2.0kb downstream 3923 true Chr1: 5929909-5933831 Arabidopsis thaliana
AT1G17330 2.0kb downstream 2.0kb downstream 2000 false Chr1: 5931832-5933831 Arabidopsis thaliana
AT1G17330 5.0kb upstream 5.0kb upstream 6923 true Chr1: 5924909-5931831 Arabidopsis thaliana
AT1G17330 5.0kb upstream 5.0kb upstream 5000 false Chr1: 5924909-5929908 Arabidopsis thaliana
AT1G17330 5.0kb downstream 5.0kb downstream 6923 true Chr1: 5929909-5936831 Arabidopsis thaliana
AT1G17330 5.0kb downstream 5.0kb downstream 5000 false Chr1: 5931832-5936831 Arabidopsis thaliana
AT1G17330 10.0kb upstream 10.0kb upstream 11923 true Chr1: 5919909-5931831 Arabidopsis thaliana
AT1G17330 10.0kb upstream 10.0kb upstream 10000 false Chr1: 5919909-5929908 Arabidopsis thaliana
AT1G17330 10.0kb downstream 10.0kb downstream 11923 true Chr1: 5929909-5941831 Arabidopsis thaliana
AT1G17330 10.0kb downstream 10.0kb downstream 10000 false Chr1: 5931832-5941831 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366575 5261 Brassicaceae View MSA
123830554 5264 Brassicales-Malvales View MSA
124342124 5266 SBM View MSA
124238033 5268 Malvidae View MSA
124068985 5270 Rosid View MSA
123739075 5271 Pentapetalae View MSA
122790002 5272 Eudicot View MSA
122047991 5273 Angiosperm View MSA
121346124 5274 Embryophyte View MSA
123423985 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.716       High
cufflinks 8.115        
cufflinks 7.917        
cufflinks 7.869        
cufflinks 8.112        
cufflinks 7.308        

0 Strain