Gene : AT1G17200 A. thaliana TAIR10
Defline:  (1 of 2) PTHR11615//PTHR11615:SF151 - NITRATE, FROMATE, IRON DEHYDROGENASE // SUBFAMILY NOT NAMED Genomic Order:  1731
Name:  ? AT1G17200 Secondary Identifier:  ? PAC:19655275
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G17200 0.5kb upstream 0.5kb upstream 2142 true Chr1: 5877900-5880041 Arabidopsis thaliana
AT1G17200 0.5kb upstream 0.5kb upstream 500 false Chr1: 5877900-5878399 Arabidopsis thaliana
AT1G17200 0.5kb downstream 0.5kb downstream 2142 true Chr1: 5878400-5880541 Arabidopsis thaliana
AT1G17200 0.5kb downstream 0.5kb downstream 500 false Chr1: 5880042-5880541 Arabidopsis thaliana
AT1G17200 1.0kb upstream 1.0kb upstream 2642 true Chr1: 5877400-5880041 Arabidopsis thaliana
AT1G17200 1.0kb upstream 1.0kb upstream 1000 false Chr1: 5877400-5878399 Arabidopsis thaliana
AT1G17200 1.0kb downstream 1.0kb downstream 2642 true Chr1: 5878400-5881041 Arabidopsis thaliana
AT1G17200 1.0kb downstream 1.0kb downstream 1000 false Chr1: 5880042-5881041 Arabidopsis thaliana
AT1G17200 2.0kb upstream 2.0kb upstream 3642 true Chr1: 5876400-5880041 Arabidopsis thaliana
AT1G17200 2.0kb upstream 2.0kb upstream 2000 false Chr1: 5876400-5878399 Arabidopsis thaliana
AT1G17200 2.0kb downstream 2.0kb downstream 3642 true Chr1: 5878400-5882041 Arabidopsis thaliana
AT1G17200 2.0kb downstream 2.0kb downstream 2000 false Chr1: 5880042-5882041 Arabidopsis thaliana
AT1G17200 5.0kb upstream 5.0kb upstream 6642 true Chr1: 5873400-5880041 Arabidopsis thaliana
AT1G17200 5.0kb upstream 5.0kb upstream 5000 false Chr1: 5873400-5878399 Arabidopsis thaliana
AT1G17200 5.0kb downstream 5.0kb downstream 6642 true Chr1: 5878400-5885041 Arabidopsis thaliana
AT1G17200 5.0kb downstream 5.0kb downstream 5000 false Chr1: 5880042-5885041 Arabidopsis thaliana
AT1G17200 10.0kb upstream 10.0kb upstream 11642 true Chr1: 5868400-5880041 Arabidopsis thaliana
AT1G17200 10.0kb upstream 10.0kb upstream 10000 false Chr1: 5868400-5878399 Arabidopsis thaliana
AT1G17200 10.0kb downstream 10.0kb downstream 11642 true Chr1: 5878400-5890041 Arabidopsis thaliana
AT1G17200 10.0kb downstream 10.0kb downstream 10000 false Chr1: 5880042-5890041 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375241 5261 Brassicaceae View MSA
123832672 5264 Brassicales-Malvales View MSA
124346306 5266 SBM View MSA
124239539 5268 Malvidae View MSA
124060593 5270 Rosid View MSA
123737028 5271 Pentapetalae View MSA
122789181 5272 Eudicot View MSA
122045392 5273 Angiosperm View MSA
121351638 5274 Embryophyte View MSA
123382256 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.604        
cufflinks 0.246     Low  
cufflinks 7.364        
cufflinks 0.474        
cufflinks 7.32        
cufflinks 0.082     Low Low

0 Strain