Gene : AT1G17070 A. thaliana TAIR10
Defline:  (1 of 2) K13103 - tuftelin-interacting protein 11 (TFIP11) Genomic Order:  1716
Name:  ? AT1G17070 Secondary Identifier:  ? PAC:19653533
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G17070 0.5kb upstream 0.5kb upstream 3243 true Chr1: 5837090-5840332 Arabidopsis thaliana
AT1G17070 0.5kb upstream 0.5kb upstream 500 false Chr1: 5837090-5837589 Arabidopsis thaliana
AT1G17070 0.5kb downstream 0.5kb downstream 3243 true Chr1: 5837590-5840832 Arabidopsis thaliana
AT1G17070 0.5kb downstream 0.5kb downstream 500 false Chr1: 5840333-5840832 Arabidopsis thaliana
AT1G17070 1.0kb upstream 1.0kb upstream 3743 true Chr1: 5836590-5840332 Arabidopsis thaliana
AT1G17070 1.0kb upstream 1.0kb upstream 1000 false Chr1: 5836590-5837589 Arabidopsis thaliana
AT1G17070 1.0kb downstream 1.0kb downstream 3743 true Chr1: 5837590-5841332 Arabidopsis thaliana
AT1G17070 1.0kb downstream 1.0kb downstream 1000 false Chr1: 5840333-5841332 Arabidopsis thaliana
AT1G17070 2.0kb upstream 2.0kb upstream 4743 true Chr1: 5835590-5840332 Arabidopsis thaliana
AT1G17070 2.0kb upstream 2.0kb upstream 2000 false Chr1: 5835590-5837589 Arabidopsis thaliana
AT1G17070 2.0kb downstream 2.0kb downstream 4743 true Chr1: 5837590-5842332 Arabidopsis thaliana
AT1G17070 2.0kb downstream 2.0kb downstream 2000 false Chr1: 5840333-5842332 Arabidopsis thaliana
AT1G17070 5.0kb upstream 5.0kb upstream 7743 true Chr1: 5832590-5840332 Arabidopsis thaliana
AT1G17070 5.0kb upstream 5.0kb upstream 5000 false Chr1: 5832590-5837589 Arabidopsis thaliana
AT1G17070 5.0kb downstream 5.0kb downstream 7743 true Chr1: 5837590-5845332 Arabidopsis thaliana
AT1G17070 5.0kb downstream 5.0kb downstream 5000 false Chr1: 5840333-5845332 Arabidopsis thaliana
AT1G17070 10.0kb upstream 10.0kb upstream 12743 true Chr1: 5827590-5840332 Arabidopsis thaliana
AT1G17070 10.0kb upstream 10.0kb upstream 10000 false Chr1: 5827590-5837589 Arabidopsis thaliana
AT1G17070 10.0kb downstream 10.0kb downstream 12743 true Chr1: 5837590-5850332 Arabidopsis thaliana
AT1G17070 10.0kb downstream 10.0kb downstream 10000 false Chr1: 5840333-5850332 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367957 5261 Brassicaceae View MSA
123830242 5264 Brassicales-Malvales View MSA
124344730 5266 SBM View MSA
124241345 5268 Malvidae View MSA
124068851 5270 Rosid View MSA
123740227 5271 Pentapetalae View MSA
122791304 5272 Eudicot View MSA
122042615 5273 Angiosperm View MSA
121343890 5274 Embryophyte View MSA
123423918 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.256        
cufflinks 6.208        
cufflinks 4.028       Low
cufflinks 7.655        
cufflinks 4.746        
cufflinks 7.729       High

0 Strain