Gene : HAC12 A. thaliana TAIR10
Primary Identifier:  ? AT1G16710 Defline:  (1 of 5) K04498 - E1A/CREB-binding protein (EP300, CREBBP, KAT3)
Genomic Order:  1677 Name:  ? AT1G16710
Secondary Identifier:  ? PAC:19658304
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0 Pathways

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G16710 0.5kb upstream 0.5kb upstream 8896 true Chr1: 5713719-5722614 Arabidopsis thaliana
AT1G16710 0.5kb upstream 0.5kb upstream 500 false Chr1: 5713719-5714218 Arabidopsis thaliana
AT1G16710 0.5kb downstream 0.5kb downstream 8896 true Chr1: 5714219-5723114 Arabidopsis thaliana
AT1G16710 0.5kb downstream 0.5kb downstream 500 false Chr1: 5722615-5723114 Arabidopsis thaliana
AT1G16710 1.0kb upstream 1.0kb upstream 9396 true Chr1: 5713219-5722614 Arabidopsis thaliana
AT1G16710 1.0kb upstream 1.0kb upstream 1000 false Chr1: 5713219-5714218 Arabidopsis thaliana
AT1G16710 1.0kb downstream 1.0kb downstream 9396 true Chr1: 5714219-5723614 Arabidopsis thaliana
AT1G16710 1.0kb downstream 1.0kb downstream 1000 false Chr1: 5722615-5723614 Arabidopsis thaliana
AT1G16710 2.0kb upstream 2.0kb upstream 10396 true Chr1: 5712219-5722614 Arabidopsis thaliana
AT1G16710 2.0kb upstream 2.0kb upstream 2000 false Chr1: 5712219-5714218 Arabidopsis thaliana
AT1G16710 2.0kb downstream 2.0kb downstream 10396 true Chr1: 5714219-5724614 Arabidopsis thaliana
AT1G16710 2.0kb downstream 2.0kb downstream 2000 false Chr1: 5722615-5724614 Arabidopsis thaliana
AT1G16710 5.0kb upstream 5.0kb upstream 13396 true Chr1: 5709219-5722614 Arabidopsis thaliana
AT1G16710 5.0kb upstream 5.0kb upstream 5000 false Chr1: 5709219-5714218 Arabidopsis thaliana
AT1G16710 5.0kb downstream 5.0kb downstream 13396 true Chr1: 5714219-5727614 Arabidopsis thaliana
AT1G16710 5.0kb downstream 5.0kb downstream 5000 false Chr1: 5722615-5727614 Arabidopsis thaliana
AT1G16710 10.0kb upstream 10.0kb upstream 18396 true Chr1: 5704219-5722614 Arabidopsis thaliana
AT1G16710 10.0kb upstream 10.0kb upstream 10000 false Chr1: 5704219-5714218 Arabidopsis thaliana
AT1G16710 10.0kb downstream 10.0kb downstream 18396 true Chr1: 5714219-5732614 Arabidopsis thaliana
AT1G16710 10.0kb downstream 10.0kb downstream 10000 false Chr1: 5722615-5732614 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369482 5261 Brassicaceae View MSA
123839846 5264 Brassicales-Malvales View MSA
124344458 5266 SBM View MSA
124238296 5268 Malvidae View MSA
124067227 5270 Rosid View MSA
123747259 5271 Pentapetalae View MSA
122789535 5272 Eudicot View MSA
122047201 5273 Angiosperm View MSA
121350917 5274 Embryophyte View MSA
123426645 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.429        
cufflinks 5.103        
cufflinks 2.732       Low
cufflinks 5.112        
cufflinks 3.056        
cufflinks 4.691        

0 Strain