Gene : AT1G16650 A. thaliana TAIR10
Defline:  (1 of 1) PTHR12496:SF0 - METHYLTRANSFERASE-LIKE PROTEIN 25 Genomic Order:  1671
Name:  ? AT1G16650 Secondary Identifier:  ? PAC:19651682
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G16650 0.5kb upstream 0.5kb upstream 3756 true Chr1: 5687443-5691198 Arabidopsis thaliana
AT1G16650 0.5kb upstream 0.5kb upstream 500 false Chr1: 5687443-5687942 Arabidopsis thaliana
AT1G16650 0.5kb downstream 0.5kb downstream 3756 true Chr1: 5687943-5691698 Arabidopsis thaliana
AT1G16650 0.5kb downstream 0.5kb downstream 500 false Chr1: 5691199-5691698 Arabidopsis thaliana
AT1G16650 1.0kb upstream 1.0kb upstream 4256 true Chr1: 5686943-5691198 Arabidopsis thaliana
AT1G16650 1.0kb upstream 1.0kb upstream 1000 false Chr1: 5686943-5687942 Arabidopsis thaliana
AT1G16650 1.0kb downstream 1.0kb downstream 4256 true Chr1: 5687943-5692198 Arabidopsis thaliana
AT1G16650 1.0kb downstream 1.0kb downstream 1000 false Chr1: 5691199-5692198 Arabidopsis thaliana
AT1G16650 2.0kb upstream 2.0kb upstream 5256 true Chr1: 5685943-5691198 Arabidopsis thaliana
AT1G16650 2.0kb upstream 2.0kb upstream 2000 false Chr1: 5685943-5687942 Arabidopsis thaliana
AT1G16650 2.0kb downstream 2.0kb downstream 5256 true Chr1: 5687943-5693198 Arabidopsis thaliana
AT1G16650 2.0kb downstream 2.0kb downstream 2000 false Chr1: 5691199-5693198 Arabidopsis thaliana
AT1G16650 5.0kb upstream 5.0kb upstream 8256 true Chr1: 5682943-5691198 Arabidopsis thaliana
AT1G16650 5.0kb upstream 5.0kb upstream 5000 false Chr1: 5682943-5687942 Arabidopsis thaliana
AT1G16650 5.0kb downstream 5.0kb downstream 8256 true Chr1: 5687943-5696198 Arabidopsis thaliana
AT1G16650 5.0kb downstream 5.0kb downstream 5000 false Chr1: 5691199-5696198 Arabidopsis thaliana
AT1G16650 10.0kb upstream 10.0kb upstream 13256 true Chr1: 5677943-5691198 Arabidopsis thaliana
AT1G16650 10.0kb upstream 10.0kb upstream 10000 false Chr1: 5677943-5687942 Arabidopsis thaliana
AT1G16650 10.0kb downstream 10.0kb downstream 13256 true Chr1: 5687943-5701198 Arabidopsis thaliana
AT1G16650 10.0kb downstream 10.0kb downstream 10000 false Chr1: 5691199-5701198 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041435 5273 Angiosperm View MSA
122366508 5261 Brassicaceae View MSA
123834166 5264 Brassicales-Malvales View MSA
124321929 5266 SBM View MSA
124238986 5268 Malvidae View MSA
124063111 5270 Rosid View MSA
123747553 5271 Pentapetalae View MSA
122789277 5272 Eudicot View MSA
121344340 5274 Embryophyte View MSA
123380024 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.283        
cufflinks 3.539       High
cufflinks 1.986       Low
cufflinks 3.376       High
cufflinks 2.282        
cufflinks 2.856        

0 Strain