Gene : AT1G29850 A. thaliana TAIR10
Defline:  (1 of 1) K06875 - programmed cell death protein 5 (PDCD5, TFAR19) Genomic Order:  2949
Name:  ? AT1G29850 Secondary Identifier:  ? PAC:19654919
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G29850 0.5kb upstream 0.5kb upstream 2693 true Chr1: 10447254-10449946 Arabidopsis thaliana
AT1G29850 0.5kb upstream 0.5kb upstream 500 false Chr1: 10447254-10447753 Arabidopsis thaliana
AT1G29850 0.5kb downstream 0.5kb downstream 2693 true Chr1: 10447754-10450446 Arabidopsis thaliana
AT1G29850 0.5kb downstream 0.5kb downstream 500 false Chr1: 10449947-10450446 Arabidopsis thaliana
AT1G29850 1.0kb upstream 1.0kb upstream 3193 true Chr1: 10446754-10449946 Arabidopsis thaliana
AT1G29850 1.0kb upstream 1.0kb upstream 1000 false Chr1: 10446754-10447753 Arabidopsis thaliana
AT1G29850 1.0kb downstream 1.0kb downstream 3193 true Chr1: 10447754-10450946 Arabidopsis thaliana
AT1G29850 1.0kb downstream 1.0kb downstream 1000 false Chr1: 10449947-10450946 Arabidopsis thaliana
AT1G29850 2.0kb upstream 2.0kb upstream 4193 true Chr1: 10445754-10449946 Arabidopsis thaliana
AT1G29850 2.0kb upstream 2.0kb upstream 2000 false Chr1: 10445754-10447753 Arabidopsis thaliana
AT1G29850 2.0kb downstream 2.0kb downstream 4193 true Chr1: 10447754-10451946 Arabidopsis thaliana
AT1G29850 2.0kb downstream 2.0kb downstream 2000 false Chr1: 10449947-10451946 Arabidopsis thaliana
AT1G29850 5.0kb upstream 5.0kb upstream 7193 true Chr1: 10442754-10449946 Arabidopsis thaliana
AT1G29850 5.0kb upstream 5.0kb upstream 5000 false Chr1: 10442754-10447753 Arabidopsis thaliana
AT1G29850 5.0kb downstream 5.0kb downstream 7193 true Chr1: 10447754-10454946 Arabidopsis thaliana
AT1G29850 5.0kb downstream 5.0kb downstream 5000 false Chr1: 10449947-10454946 Arabidopsis thaliana
AT1G29850 10.0kb upstream 10.0kb upstream 12193 true Chr1: 10437754-10449946 Arabidopsis thaliana
AT1G29850 10.0kb upstream 10.0kb upstream 10000 false Chr1: 10437754-10447753 Arabidopsis thaliana
AT1G29850 10.0kb downstream 10.0kb downstream 12193 true Chr1: 10447754-10459946 Arabidopsis thaliana
AT1G29850 10.0kb downstream 10.0kb downstream 10000 false Chr1: 10449947-10459946 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122328801 5261 Brassicaceae Singleton cluster - no MSA
123837212 5264 Brassicales-Malvales View MSA
124343337 5266 SBM View MSA
124238219 5268 Malvidae View MSA
124064859 5270 Rosid View MSA
123737967 5271 Pentapetalae View MSA
122786334 5272 Eudicot View MSA
122044055 5273 Angiosperm View MSA
121343869 5274 Embryophyte View MSA
123426803 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.748        
cufflinks 10.827       High
cufflinks 7.214       Low
cufflinks 9.769        
cufflinks 7.395       Low
cufflinks 10.42        

0 Strain