Gene : ATCHX1 A. thaliana TAIR10
Primary Identifier:  ? AT1G16380 Defline:  (1 of 2) PTHR32468//PTHR32468:SF28 - FAMILY NOT NAMED // CATION/H(+) ANTIPORTER 1-RELATED
Genomic Order:  1647 Name:  ? AT1G16380
Secondary Identifier:  ? PAC:19655121
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G16380 0.5kb upstream 0.5kb upstream 3415 true Chr1: 5598453-5601867 Arabidopsis thaliana
AT1G16380 0.5kb upstream 0.5kb upstream 500 false Chr1: 5601368-5601867 Arabidopsis thaliana
AT1G16380 0.5kb downstream 0.5kb downstream 3415 true Chr1: 5597953-5601367 Arabidopsis thaliana
AT1G16380 0.5kb downstream 0.5kb downstream 500 false Chr1: 5597953-5598452 Arabidopsis thaliana
AT1G16380 1.0kb upstream 1.0kb upstream 3915 true Chr1: 5598453-5602367 Arabidopsis thaliana
AT1G16380 1.0kb upstream 1.0kb upstream 1000 false Chr1: 5601368-5602367 Arabidopsis thaliana
AT1G16380 1.0kb downstream 1.0kb downstream 3915 true Chr1: 5597453-5601367 Arabidopsis thaliana
AT1G16380 1.0kb downstream 1.0kb downstream 1000 false Chr1: 5597453-5598452 Arabidopsis thaliana
AT1G16380 2.0kb upstream 2.0kb upstream 4915 true Chr1: 5598453-5603367 Arabidopsis thaliana
AT1G16380 2.0kb upstream 2.0kb upstream 2000 false Chr1: 5601368-5603367 Arabidopsis thaliana
AT1G16380 2.0kb downstream 2.0kb downstream 4915 true Chr1: 5596453-5601367 Arabidopsis thaliana
AT1G16380 2.0kb downstream 2.0kb downstream 2000 false Chr1: 5596453-5598452 Arabidopsis thaliana
AT1G16380 5.0kb upstream 5.0kb upstream 7915 true Chr1: 5598453-5606367 Arabidopsis thaliana
AT1G16380 5.0kb upstream 5.0kb upstream 5000 false Chr1: 5601368-5606367 Arabidopsis thaliana
AT1G16380 5.0kb downstream 5.0kb downstream 7915 true Chr1: 5593453-5601367 Arabidopsis thaliana
AT1G16380 5.0kb downstream 5.0kb downstream 5000 false Chr1: 5593453-5598452 Arabidopsis thaliana
AT1G16380 10.0kb upstream 10.0kb upstream 12915 true Chr1: 5598453-5611367 Arabidopsis thaliana
AT1G16380 10.0kb upstream 10.0kb upstream 10000 false Chr1: 5601368-5611367 Arabidopsis thaliana
AT1G16380 10.0kb downstream 10.0kb downstream 12915 true Chr1: 5588453-5601367 Arabidopsis thaliana
AT1G16380 10.0kb downstream 10.0kb downstream 10000 false Chr1: 5588453-5598452 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366233 5261 Brassicaceae View MSA
123799136 5264 Brassicales-Malvales View MSA
124347041 5266 SBM View MSA
124244632 5268 Malvidae View MSA
124061275 5270 Rosid View MSA
123738472 5271 Pentapetalae View MSA
122769923 5272 Eudicot View MSA
122048116 5273 Angiosperm View MSA
121310852 5274 Embryophyte View MSA
123348237 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain