Gene : PAB1 A. thaliana TAIR10
Primary Identifier:  ? AT1G16470 Defline:  (1 of 2) K02726 - 20S proteasome subunit alpha 2 (PSMA2)
Genomic Order:  1656 Name:  ? AT1G16470
Secondary Identifier:  ? PAC:19651668
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G16470 0.5kb upstream 0.5kb upstream 3358 true Chr1: 5622286-5625643 Arabidopsis thaliana
AT1G16470 0.5kb upstream 0.5kb upstream 500 false Chr1: 5622286-5622785 Arabidopsis thaliana
AT1G16470 0.5kb downstream 0.5kb downstream 3358 true Chr1: 5622786-5626143 Arabidopsis thaliana
AT1G16470 0.5kb downstream 0.5kb downstream 500 false Chr1: 5625644-5626143 Arabidopsis thaliana
AT1G16470 1.0kb upstream 1.0kb upstream 3858 true Chr1: 5621786-5625643 Arabidopsis thaliana
AT1G16470 1.0kb upstream 1.0kb upstream 1000 false Chr1: 5621786-5622785 Arabidopsis thaliana
AT1G16470 1.0kb downstream 1.0kb downstream 3858 true Chr1: 5622786-5626643 Arabidopsis thaliana
AT1G16470 1.0kb downstream 1.0kb downstream 1000 false Chr1: 5625644-5626643 Arabidopsis thaliana
AT1G16470 2.0kb upstream 2.0kb upstream 4858 true Chr1: 5620786-5625643 Arabidopsis thaliana
AT1G16470 2.0kb upstream 2.0kb upstream 2000 false Chr1: 5620786-5622785 Arabidopsis thaliana
AT1G16470 2.0kb downstream 2.0kb downstream 4858 true Chr1: 5622786-5627643 Arabidopsis thaliana
AT1G16470 2.0kb downstream 2.0kb downstream 2000 false Chr1: 5625644-5627643 Arabidopsis thaliana
AT1G16470 5.0kb upstream 5.0kb upstream 7858 true Chr1: 5617786-5625643 Arabidopsis thaliana
AT1G16470 5.0kb upstream 5.0kb upstream 5000 false Chr1: 5617786-5622785 Arabidopsis thaliana
AT1G16470 5.0kb downstream 5.0kb downstream 7858 true Chr1: 5622786-5630643 Arabidopsis thaliana
AT1G16470 5.0kb downstream 5.0kb downstream 5000 false Chr1: 5625644-5630643 Arabidopsis thaliana
AT1G16470 10.0kb upstream 10.0kb upstream 12858 true Chr1: 5612786-5625643 Arabidopsis thaliana
AT1G16470 10.0kb upstream 10.0kb upstream 10000 false Chr1: 5612786-5622785 Arabidopsis thaliana
AT1G16470 10.0kb downstream 10.0kb downstream 12858 true Chr1: 5622786-5635643 Arabidopsis thaliana
AT1G16470 10.0kb downstream 10.0kb downstream 10000 false Chr1: 5625644-5635643 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026291 5273 Angiosperm View MSA
122376860 5261 Brassicaceae View MSA
123841015 5264 Brassicales-Malvales View MSA
124350463 5266 SBM View MSA
124241127 5268 Malvidae View MSA
124069190 5270 Rosid View MSA
123746972 5271 Pentapetalae View MSA
122795211 5272 Eudicot View MSA
121350421 5274 Embryophyte View MSA
123426464 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.477       High
cufflinks 9.911       Low
cufflinks 10.446        
cufflinks 11.468        
cufflinks 11.582        
cufflinks 11.629        

0 Strain